Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.75■□□□□ 0.91
HADHBP55084 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.75■□□□□ 0.91
HADHBP55084 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.75■□□□□ 0.91
HADHBP55084 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HADHBP55084 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HADHBP55084 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HADHBP55084 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HADHBP55084 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.75■□□□□ 0.91
HADHBP55084 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HADHBP55084 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HADHBP55084 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HADHBP55084 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HADHBP55084 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.75■□□□□ 0.91
HADHBP55084 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HADHBP55084 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HADHBP55084 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HADHBP55084 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.74■□□□□ 0.91
HADHBP55084 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HADHBP55084 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.74■□□□□ 0.91
HADHBP55084 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.74■□□□□ 0.91
HADHBP55084 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.74■□□□□ 0.91
HADHBP55084 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HADHBP55084 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.74■□□□□ 0.91
HADHBP55084 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.74■□□□□ 0.91
HADHBP55084 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
HADHBP55084 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HADHBP55084 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.74■□□□□ 0.91
HADHBP55084 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HADHBP55084 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HADHBP55084 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HADHBP55084 AC018553.1-201ENST00000616682 1458 ntBASIC20.74■□□□□ 0.91
HADHBP55084 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.74■□□□□ 0.91
HADHBP55084 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HADHBP55084 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HADHBP55084 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HADHBP55084 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HADHBP55084 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.73■□□□□ 0.91
HADHBP55084 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HADHBP55084 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HADHBP55084 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HADHBP55084 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.73■□□□□ 0.91
HADHBP55084 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
HADHBP55084 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.73■□□□□ 0.91
HADHBP55084 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.73■□□□□ 0.91
HADHBP55084 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HADHBP55084 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HADHBP55084 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.73■□□□□ 0.91
HADHBP55084 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HADHBP55084 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HADHBP55084 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
HADHBP55084 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HADHBP55084 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HADHBP55084 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.73■□□□□ 0.91
HADHBP55084 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HADHBP55084 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HADHBP55084 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
HADHBP55084 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HADHBP55084 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HADHBP55084 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HADHBP55084 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HADHBP55084 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
HADHBP55084 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HADHBP55084 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.72■□□□□ 0.91
HADHBP55084 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.72■□□□□ 0.91
HADHBP55084 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HADHBP55084 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HADHBP55084 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HADHBP55084 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.72■□□□□ 0.91
HADHBP55084 AC004911.1-201ENST00000416316 871 ntBASIC20.72■□□□□ 0.91
HADHBP55084 AC073210.2-201ENST00000430369 194 ntBASIC20.72■□□□□ 0.91
HADHBP55084 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HADHBP55084 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.72■□□□□ 0.91
HADHBP55084 AC022517.1-201ENST00000592429 346 ntBASIC20.72■□□□□ 0.91
HADHBP55084 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HADHBP55084 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.72■□□□□ 0.91
HADHBP55084 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.72■□□□□ 0.91
HADHBP55084 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
HADHBP55084 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HADHBP55084 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HADHBP55084 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HADHBP55084 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.72■□□□□ 0.91
HADHBP55084 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HADHBP55084 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HADHBP55084 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.72■□□□□ 0.91
HADHBP55084 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HADHBP55084 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HADHBP55084 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
HADHBP55084 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.72■□□□□ 0.91
HADHBP55084 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HADHBP55084 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.71■□□□□ 0.91
HADHBP55084 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
HADHBP55084 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.71■□□□□ 0.91
HADHBP55084 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.71■□□□□ 0.91
HADHBP55084 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HADHBP55084 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HADHBP55084 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HADHBP55084 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HADHBP55084 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.71■□□□□ 0.91
HADHBP55084 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.71■□□□□ 0.91
HADHBP55084 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms