Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC104076.2-201ENST00000448912 469 ntBASIC17.31■□□□□ 0.36
HCFC1P51610 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.31■□□□□ 0.36
HCFC1P51610 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.31■□□□□ 0.36
HCFC1P51610 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC1P51610 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.31■□□□□ 0.36
HCFC1P51610 AC022616.7-201ENST00000525383 220 ntBASIC17.31■□□□□ 0.36
HCFC1P51610 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.31■□□□□ 0.36
HCFC1P51610 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC1P51610 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HCFC1P51610 FSCN1P1-201ENST00000568912 1481 ntBASIC17.31■□□□□ 0.36
HCFC1P51610 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC1P51610 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC1P51610 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC1P51610 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.31■□□□□ 0.36
HCFC1P51610 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HCFC1P51610 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC1P51610 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
HCFC1P51610 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HCFC1P51610 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.3■□□□□ 0.36
HCFC1P51610 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.3■□□□□ 0.36
HCFC1P51610 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC1P51610 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC1P51610 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.3■□□□□ 0.36
HCFC1P51610 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.3■□□□□ 0.36
HCFC1P51610 AC011506.1-201ENST00000474329 610 ntBASIC17.3■□□□□ 0.36
HCFC1P51610 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
HCFC1P51610 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.3■□□□□ 0.36
HCFC1P51610 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC1P51610 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HCFC1P51610 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HCFC1P51610 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC1P51610 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC1P51610 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.3■□□□□ 0.36
HCFC1P51610 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC1P51610 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC1P51610 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC1P51610 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HCFC1P51610 AK4P3-201ENST00000418260 669 ntBASIC17.3■□□□□ 0.36
HCFC1P51610 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.3■□□□□ 0.36
HCFC1P51610 LIN28AP1-201ENST00000429574 405 ntBASIC17.3■□□□□ 0.36
HCFC1P51610 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.3■□□□□ 0.36
HCFC1P51610 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.3■□□□□ 0.36
HCFC1P51610 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.3■□□□□ 0.36
HCFC1P51610 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.3■□□□□ 0.36
HCFC1P51610 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.29■□□□□ 0.36
HCFC1P51610 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC1P51610 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC1P51610 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HCFC1P51610 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.29■□□□□ 0.36
HCFC1P51610 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC1P51610 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC1P51610 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC1P51610 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.29■□□□□ 0.36
HCFC1P51610 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC1P51610 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HCFC1P51610 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC1P51610 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HCFC1P51610 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.29■□□□□ 0.36
HCFC1P51610 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC1P51610 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.28■□□□□ 0.36
HCFC1P51610 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC1P51610 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.28■□□□□ 0.36
HCFC1P51610 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HCFC1P51610 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC1P51610 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC1P51610 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.28■□□□□ 0.36
HCFC1P51610 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.28■□□□□ 0.36
HCFC1P51610 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC1P51610 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HCFC1P51610 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC1P51610 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC1P51610 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC1P51610 AL121603.2-201ENST00000557373 2117 ntBASIC17.28■□□□□ 0.36
HCFC1P51610 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.28■□□□□ 0.36
HCFC1P51610 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.28■□□□□ 0.36
HCFC1P51610 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.28■□□□□ 0.36
HCFC1P51610 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC1P51610 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC1P51610 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC1P51610 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.28■□□□□ 0.36
HCFC1P51610 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC1P51610 MESTP1-201ENST00000404287 994 ntBASIC17.28■□□□□ 0.36
HCFC1P51610 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC1P51610 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC1P51610 AC097488.1-201ENST00000507834 756 ntBASIC17.28■□□□□ 0.36
HCFC1P51610 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
HCFC1P51610 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
HCFC1P51610 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC1P51610 AL590326.2-201ENST00000625139 305 ntBASIC17.28■□□□□ 0.36
HCFC1P51610 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.28■□□□□ 0.36
HCFC1P51610 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HCFC1P51610 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.28■□□□□ 0.36
HCFC1P51610 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
HCFC1P51610 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCFC1P51610 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HCFC1P51610 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HCFC1P51610 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HCFC1P51610 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.27■□□□□ 0.36
HCFC1P51610 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HCFC1P51610 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms