Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HLCSP50747 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.89■□□□□ 0.62
HLCSP50747 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.89■□□□□ 0.61
HLCSP50747 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLCSP50747 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLCSP50747 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.89■□□□□ 0.61
HLCSP50747 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLCSP50747 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HLCSP50747 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.89■□□□□ 0.61
HLCSP50747 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLCSP50747 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLCSP50747 FP700111.2-201ENST00000619190 1892 ntBASIC18.89■□□□□ 0.61
HLCSP50747 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLCSP50747 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLCSP50747 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLCSP50747 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HLCSP50747 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.89■□□□□ 0.61
HLCSP50747 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.89■□□□□ 0.61
HLCSP50747 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.89■□□□□ 0.61
HLCSP50747 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.89■□□□□ 0.61
HLCSP50747 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
HLCSP50747 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.89■□□□□ 0.61
HLCSP50747 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLCSP50747 AC125437.2-201ENST00000625180 2167 ntBASIC18.89■□□□□ 0.61
HLCSP50747 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HLCSP50747 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HLCSP50747 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HLCSP50747 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLCSP50747 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.88■□□□□ 0.61
HLCSP50747 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLCSP50747 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HLCSP50747 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLCSP50747 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLCSP50747 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLCSP50747 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.88■□□□□ 0.61
HLCSP50747 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
HLCSP50747 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.88■□□□□ 0.61
HLCSP50747 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLCSP50747 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLCSP50747 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLCSP50747 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.88■□□□□ 0.61
HLCSP50747 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.88■□□□□ 0.61
HLCSP50747 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.88■□□□□ 0.61
HLCSP50747 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLCSP50747 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HLCSP50747 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLCSP50747 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLCSP50747 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HLCSP50747 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HLCSP50747 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.88■□□□□ 0.61
HLCSP50747 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLCSP50747 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HLCSP50747 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLCSP50747 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLCSP50747 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HLCSP50747 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLCSP50747 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLCSP50747 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLCSP50747 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLCSP50747 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.87■□□□□ 0.61
HLCSP50747 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HLCSP50747 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLCSP50747 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.87■□□□□ 0.61
HLCSP50747 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HLCSP50747 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLCSP50747 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.87■□□□□ 0.61
HLCSP50747 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.87■□□□□ 0.61
HLCSP50747 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HLCSP50747 AL158211.5-201ENST00000623583 2518 ntBASIC18.87■□□□□ 0.61
HLCSP50747 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLCSP50747 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLCSP50747 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLCSP50747 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
HLCSP50747 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLCSP50747 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLCSP50747 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HLCSP50747 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLCSP50747 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
HLCSP50747 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLCSP50747 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.86■□□□□ 0.61
HLCSP50747 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLCSP50747 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLCSP50747 AC026471.1-201ENST00000564629 3026 ntBASIC18.86■□□□□ 0.61
HLCSP50747 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLCSP50747 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HLCSP50747 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HLCSP50747 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLCSP50747 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLCSP50747 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLCSP50747 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLCSP50747 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.86■□□□□ 0.61
HLCSP50747 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.86■□□□□ 0.61
HLCSP50747 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
HLCSP50747 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.86■□□□□ 0.61
HLCSP50747 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.86■□□□□ 0.61
HLCSP50747 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLCSP50747 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HLCSP50747 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLCSP50747 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.86■□□□□ 0.61
HLCSP50747 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms