Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IDH3AP50213 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IDH3AP50213 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
IDH3AP50213 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IDH3AP50213 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IDH3AP50213 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IDH3AP50213 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IDH3AP50213 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IDH3AP50213 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IDH3AP50213 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
IDH3AP50213 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IDH3AP50213 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IDH3AP50213 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.25■□□□□ 0.67
IDH3AP50213 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3AP50213 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3AP50213 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.24■□□□□ 0.67
IDH3AP50213 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3AP50213 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.24■□□□□ 0.67
IDH3AP50213 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
IDH3AP50213 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3AP50213 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3AP50213 AP001271.2-201ENST00000624018 1556 ntBASIC19.24■□□□□ 0.67
IDH3AP50213 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3AP50213 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3AP50213 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.24■□□□□ 0.67
IDH3AP50213 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
IDH3AP50213 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
IDH3AP50213 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.24■□□□□ 0.67
IDH3AP50213 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3AP50213 KRT16P6-202ENST00000425692 1426 ntBASIC19.24■□□□□ 0.67
IDH3AP50213 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3AP50213 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3AP50213 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IDH3AP50213 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
IDH3AP50213 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3AP50213 CYP21A1P-202ENST00000354927 1481 ntBASIC19.23■□□□□ 0.67
IDH3AP50213 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.23■□□□□ 0.67
IDH3AP50213 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3AP50213 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3AP50213 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3AP50213 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.23■□□□□ 0.67
IDH3AP50213 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3AP50213 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
IDH3AP50213 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3AP50213 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3AP50213 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3AP50213 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3AP50213 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.23■□□□□ 0.67
IDH3AP50213 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3AP50213 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3AP50213 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.23■□□□□ 0.67
IDH3AP50213 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3AP50213 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
IDH3AP50213 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3AP50213 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3AP50213 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IDH3AP50213 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
IDH3AP50213 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.23■□□□□ 0.67
IDH3AP50213 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
IDH3AP50213 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.23■□□□□ 0.67
IDH3AP50213 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
IDH3AP50213 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3AP50213 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3AP50213 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
IDH3AP50213 CROCCP3-202ENST00000420820 1947 ntBASIC19.22■□□□□ 0.67
IDH3AP50213 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3AP50213 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.22■□□□□ 0.67
IDH3AP50213 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3AP50213 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3AP50213 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
IDH3AP50213 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.22■□□□□ 0.67
IDH3AP50213 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.22■□□□□ 0.67
IDH3AP50213 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3AP50213 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
IDH3AP50213 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.22■□□□□ 0.67
IDH3AP50213 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.22■□□□□ 0.67
IDH3AP50213 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3AP50213 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.22■□□□□ 0.67
IDH3AP50213 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
IDH3AP50213 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.22■□□□□ 0.67
IDH3AP50213 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.22■□□□□ 0.67
IDH3AP50213 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.22■□□□□ 0.67
IDH3AP50213 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3AP50213 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IDH3AP50213 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IDH3AP50213 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IDH3AP50213 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
IDH3AP50213 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IDH3AP50213 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IDH3AP50213 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IDH3AP50213 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.21■□□□□ 0.67
IDH3AP50213 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
IDH3AP50213 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.21■□□□□ 0.67
IDH3AP50213 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.21■□□□□ 0.67
IDH3AP50213 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.21■□□□□ 0.67
IDH3AP50213 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.21■□□□□ 0.67
IDH3AP50213 TERF1P2-201ENST00000583350 1212 ntBASIC19.21■□□□□ 0.67
IDH3AP50213 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IDH3AP50213 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.21■□□□□ 0.67
IDH3AP50213 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms