Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.81■□□□□ 0.6
PRIM2P49643 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRIM2P49643 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRIM2P49643 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRIM2P49643 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRIM2P49643 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
PRIM2P49643 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRIM2P49643 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRIM2P49643 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRIM2P49643 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.8■□□□□ 0.6
PRIM2P49643 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRIM2P49643 AL512625.2-201ENST00000417533 625 ntBASIC18.8■□□□□ 0.6
PRIM2P49643 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRIM2P49643 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.8■□□□□ 0.6
PRIM2P49643 AC073111.5-205ENST00000641717 521 ntBASIC18.8■□□□□ 0.6
PRIM2P49643 AC125437.2-201ENST00000625180 2167 ntBASIC18.8■□□□□ 0.6
PRIM2P49643 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.8■□□□□ 0.6
PRIM2P49643 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRIM2P49643 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRIM2P49643 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRIM2P49643 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRIM2P49643 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRIM2P49643 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.8■□□□□ 0.6
PRIM2P49643 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.8■□□□□ 0.6
PRIM2P49643 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRIM2P49643 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRIM2P49643 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.79■□□□□ 0.6
PRIM2P49643 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRIM2P49643 AL158211.5-201ENST00000623583 2518 ntBASIC18.79■□□□□ 0.6
PRIM2P49643 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.79■□□□□ 0.6
PRIM2P49643 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PRIM2P49643 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRIM2P49643 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRIM2P49643 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
PRIM2P49643 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PRIM2P49643 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRIM2P49643 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRIM2P49643 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.79■□□□□ 0.6
PRIM2P49643 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
PRIM2P49643 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRIM2P49643 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.79■□□□□ 0.6
PRIM2P49643 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.79■□□□□ 0.6
PRIM2P49643 AL589743.5-201ENST00000616611 1050 ntBASIC18.79■□□□□ 0.6
PRIM2P49643 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.79■□□□□ 0.6
PRIM2P49643 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRIM2P49643 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRIM2P49643 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRIM2P49643 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRIM2P49643 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRIM2P49643 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRIM2P49643 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRIM2P49643 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRIM2P49643 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.78■□□□□ 0.6
PRIM2P49643 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRIM2P49643 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.78■□□□□ 0.6
PRIM2P49643 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRIM2P49643 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRIM2P49643 AC010980.2-201ENST00000587099 1412 ntBASIC18.78■□□□□ 0.6
PRIM2P49643 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRIM2P49643 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.78■□□□□ 0.6
PRIM2P49643 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
PRIM2P49643 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PRIM2P49643 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.78■□□□□ 0.6
PRIM2P49643 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRIM2P49643 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PRIM2P49643 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.78■□□□□ 0.6
PRIM2P49643 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRIM2P49643 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PRIM2P49643 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRIM2P49643 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRIM2P49643 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRIM2P49643 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.77■□□□□ 0.6
PRIM2P49643 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRIM2P49643 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRIM2P49643 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRIM2P49643 AL355472.2-201ENST00000422958 438 ntBASIC18.77■□□□□ 0.6
PRIM2P49643 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.77■□□□□ 0.6
PRIM2P49643 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRIM2P49643 AC026185.1-201ENST00000445748 174 ntBASIC18.77■□□□□ 0.6
PRIM2P49643 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.77■□□□□ 0.6
PRIM2P49643 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.77■□□□□ 0.6
PRIM2P49643 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PRIM2P49643 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.77■□□□□ 0.6
PRIM2P49643 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.77■□□□□ 0.6
PRIM2P49643 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRIM2P49643 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRIM2P49643 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRIM2P49643 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRIM2P49643 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRIM2P49643 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.59
PRIM2P49643 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRIM2P49643 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
PRIM2P49643 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.76■□□□□ 0.59
PRIM2P49643 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRIM2P49643 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
PRIM2P49643 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRIM2P49643 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRIM2P49643 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
PRIM2P49643 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRIM2P49643 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms