Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.91■□□□□ 0.46
CENPAP49450 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CENPAP49450 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CENPAP49450 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.91■□□□□ 0.46
CENPAP49450 TMEM179-206ENST00000616017 1645 ntBASIC17.9■□□□□ 0.46
CENPAP49450 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CENPAP49450 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.9■□□□□ 0.46
CENPAP49450 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CENPAP49450 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CENPAP49450 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CENPAP49450 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.9■□□□□ 0.46
CENPAP49450 CYP21A1P-202ENST00000354927 1481 ntBASIC17.9■□□□□ 0.46
CENPAP49450 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CENPAP49450 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CENPAP49450 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CENPAP49450 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CENPAP49450 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CENPAP49450 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.9■□□□□ 0.46
CENPAP49450 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.9■□□□□ 0.46
CENPAP49450 MFSD11-216ENST00000590393 1141 ntBASIC17.9■□□□□ 0.46
CENPAP49450 AC011767.1-201ENST00000617410 1153 ntBASIC17.9■□□□□ 0.46
CENPAP49450 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CENPAP49450 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.9■□□□□ 0.46
CENPAP49450 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.9■□□□□ 0.46
CENPAP49450 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CENPAP49450 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CENPAP49450 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CENPAP49450 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CENPAP49450 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CENPAP49450 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CENPAP49450 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CENPAP49450 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CENPAP49450 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CENPAP49450 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.9■□□□□ 0.46
CENPAP49450 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CENPAP49450 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CENPAP49450 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CENPAP49450 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.89■□□□□ 0.45
CENPAP49450 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.89■□□□□ 0.45
CENPAP49450 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.89■□□□□ 0.45
CENPAP49450 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CENPAP49450 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CENPAP49450 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.89■□□□□ 0.45
CENPAP49450 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CENPAP49450 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.89■□□□□ 0.45
CENPAP49450 AC007322.4-201ENST00000509611 723 ntBASIC17.89■□□□□ 0.45
CENPAP49450 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.89■□□□□ 0.45
CENPAP49450 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.89■□□□□ 0.45
CENPAP49450 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CENPAP49450 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CENPAP49450 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.89■□□□□ 0.45
CENPAP49450 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CENPAP49450 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CENPAP49450 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.89■□□□□ 0.45
CENPAP49450 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CENPAP49450 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CENPAP49450 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CENPAP49450 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CENPAP49450 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CENPAP49450 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CENPAP49450 BX119927.1-201ENST00000636596 1552 ntBASIC17.88■□□□□ 0.45
CENPAP49450 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CENPAP49450 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CENPAP49450 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CENPAP49450 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.88■□□□□ 0.45
CENPAP49450 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.88■□□□□ 0.45
CENPAP49450 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.88■□□□□ 0.45
CENPAP49450 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CENPAP49450 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CENPAP49450 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CENPAP49450 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.88■□□□□ 0.45
CENPAP49450 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.88■□□□□ 0.45
CENPAP49450 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.88■□□□□ 0.45
CENPAP49450 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.88■□□□□ 0.45
CENPAP49450 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CENPAP49450 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.88■□□□□ 0.45
CENPAP49450 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CENPAP49450 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CENPAP49450 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CENPAP49450 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CENPAP49450 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CENPAP49450 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CENPAP49450 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CENPAP49450 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CENPAP49450 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CENPAP49450 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.88■□□□□ 0.45
CENPAP49450 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CENPAP49450 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.88■□□□□ 0.45
CENPAP49450 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CENPAP49450 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.87■□□□□ 0.45
CENPAP49450 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CENPAP49450 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
CENPAP49450 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CENPAP49450 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CENPAP49450 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CENPAP49450 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CENPAP49450 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.87■□□□□ 0.45
CENPAP49450 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CENPAP49450 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.87■□□□□ 0.45
CENPAP49450 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms