Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSKP43235 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
CTSKP43235 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.73■□□□□ 0.75
CTSKP43235 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSKP43235 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSKP43235 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSKP43235 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSKP43235 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CTSKP43235 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSKP43235 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTSKP43235 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTSKP43235 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.72■□□□□ 0.75
CTSKP43235 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
CTSKP43235 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSKP43235 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.72■□□□□ 0.75
CTSKP43235 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.72■□□□□ 0.75
CTSKP43235 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.72■□□□□ 0.75
CTSKP43235 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.72■□□□□ 0.75
CTSKP43235 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.72■□□□□ 0.75
CTSKP43235 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.72■□□□□ 0.75
CTSKP43235 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.72■□□□□ 0.75
CTSKP43235 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.72■□□□□ 0.75
CTSKP43235 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTSKP43235 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
CTSKP43235 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.72■□□□□ 0.75
CTSKP43235 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSKP43235 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTSKP43235 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSKP43235 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSKP43235 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CTSKP43235 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CTSKP43235 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.71■□□□□ 0.75
CTSKP43235 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSKP43235 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSKP43235 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSKP43235 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CTSKP43235 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
CTSKP43235 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.71■□□□□ 0.75
CTSKP43235 AC004264.1-201ENST00000608354 794 ntBASIC19.71■□□□□ 0.75
CTSKP43235 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.71■□□□□ 0.75
CTSKP43235 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTSKP43235 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.71■□□□□ 0.75
CTSKP43235 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTSKP43235 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTSKP43235 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSKP43235 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTSKP43235 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTSKP43235 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTSKP43235 AF106564.1-201ENST00000607058 2553 ntBASIC19.7■□□□□ 0.74
CTSKP43235 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CTSKP43235 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTSKP43235 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTSKP43235 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CTSKP43235 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTSKP43235 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.7■□□□□ 0.74
CTSKP43235 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTSKP43235 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTSKP43235 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTSKP43235 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CTSKP43235 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTSKP43235 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.7■□□□□ 0.74
CTSKP43235 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.69■□□□□ 0.74
CTSKP43235 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSKP43235 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.69■□□□□ 0.74
CTSKP43235 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSKP43235 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSKP43235 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSKP43235 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTSKP43235 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSKP43235 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSKP43235 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.69■□□□□ 0.74
CTSKP43235 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.69■□□□□ 0.74
CTSKP43235 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.69■□□□□ 0.74
CTSKP43235 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTSKP43235 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSKP43235 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
CTSKP43235 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSKP43235 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSKP43235 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSKP43235 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CTSKP43235 FEM1AP4-201ENST00000443167 1987 ntBASIC19.68■□□□□ 0.74
CTSKP43235 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.68■□□□□ 0.74
CTSKP43235 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSKP43235 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSKP43235 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
CTSKP43235 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTSKP43235 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSKP43235 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSKP43235 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CTSKP43235 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CTSKP43235 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSKP43235 NUDT16P1-203ENST00000513809 620 ntBASIC19.68■□□□□ 0.74
CTSKP43235 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.68■□□□□ 0.74
CTSKP43235 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.68■□□□□ 0.74
CTSKP43235 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.68■□□□□ 0.74
CTSKP43235 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTSKP43235 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CTSKP43235 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSKP43235 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSKP43235 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms