Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
RPL3P39023 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.79■□□□□ 0.6
RPL3P39023 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPL3P39023 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RPL3P39023 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPL3P39023 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.78■□□□□ 0.6
RPL3P39023 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.78■□□□□ 0.6
RPL3P39023 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.78■□□□□ 0.6
RPL3P39023 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPL3P39023 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPL3P39023 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RPL3P39023 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPL3P39023 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPL3P39023 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPL3P39023 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPL3P39023 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPL3P39023 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPL3P39023 AC004911.1-201ENST00000416316 871 ntBASIC18.78■□□□□ 0.6
RPL3P39023 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.78■□□□□ 0.6
RPL3P39023 AF201337.1-201ENST00000520239 748 ntBASIC18.78■□□□□ 0.6
RPL3P39023 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.78■□□□□ 0.6
RPL3P39023 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RPL3P39023 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.78■□□□□ 0.6
RPL3P39023 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.78■□□□□ 0.6
RPL3P39023 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RPL3P39023 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
RPL3P39023 MKRN4P-201ENST00000444706 1521 ntBASIC18.78■□□□□ 0.6
RPL3P39023 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.78■□□□□ 0.6
RPL3P39023 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.78■□□□□ 0.6
RPL3P39023 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPL3P39023 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RPL3P39023 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.78■□□□□ 0.6
RPL3P39023 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPL3P39023 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPL3P39023 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPL3P39023 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPL3P39023 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RPL3P39023 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPL3P39023 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.77■□□□□ 0.6
RPL3P39023 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPL3P39023 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RPL3P39023 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RPL3P39023 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.77■□□□□ 0.6
RPL3P39023 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
RPL3P39023 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.77■□□□□ 0.6
RPL3P39023 AL137784.2-201ENST00000607332 1000 ntBASIC18.77■□□□□ 0.6
RPL3P39023 AC073111.5-205ENST00000641717 521 ntBASIC18.77■□□□□ 0.6
RPL3P39023 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RPL3P39023 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RPL3P39023 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RPL3P39023 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RPL3P39023 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
RPL3P39023 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RPL3P39023 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
RPL3P39023 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RPL3P39023 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPL3P39023 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPL3P39023 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.76■□□□□ 0.59
RPL3P39023 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPL3P39023 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPL3P39023 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.76■□□□□ 0.59
RPL3P39023 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.76■□□□□ 0.59
RPL3P39023 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.76■□□□□ 0.59
RPL3P39023 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.76■□□□□ 0.59
RPL3P39023 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.76■□□□□ 0.59
RPL3P39023 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPL3P39023 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RPL3P39023 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RPL3P39023 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.76■□□□□ 0.59
RPL3P39023 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RPL3P39023 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RPL3P39023 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RPL3P39023 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPL3P39023 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
RPL3P39023 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
RPL3P39023 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.75■□□□□ 0.59
RPL3P39023 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPL3P39023 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPL3P39023 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPL3P39023 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPL3P39023 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPL3P39023 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.75■□□□□ 0.59
RPL3P39023 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPL3P39023 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPL3P39023 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.75■□□□□ 0.59
RPL3P39023 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPL3P39023 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.75■□□□□ 0.59
RPL3P39023 AC026185.1-201ENST00000445748 174 ntBASIC18.75■□□□□ 0.59
RPL3P39023 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.75■□□□□ 0.59
RPL3P39023 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPL3P39023 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.75■□□□□ 0.59
RPL3P39023 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RPL3P39023 AC105036.2-201ENST00000569468 176 ntBASIC18.75■□□□□ 0.59
RPL3P39023 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
RPL3P39023 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RPL3P39023 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RPL3P39023 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.75■□□□□ 0.59
RPL3P39023 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.75■□□□□ 0.59
RPL3P39023 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.75■□□□□ 0.59
RPL3P39023 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms