Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
RFC4P35249 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC25■■□□□ 1.59
RFC4P35249 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC25■■□□□ 1.59
RFC4P35249 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
RFC4P35249 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
RFC4P35249 CCR12P-201ENST00000446203 998 ntBASIC24.99■■□□□ 1.59
RFC4P35249 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
RFC4P35249 AC008040.2-201ENST00000461049 708 ntBASIC24.99■■□□□ 1.59
RFC4P35249 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC24.99■■□□□ 1.59
RFC4P35249 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
RFC4P35249 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC24.99■■□□□ 1.59
RFC4P35249 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
RFC4P35249 AC018553.1-201ENST00000616682 1458 ntBASIC24.99■■□□□ 1.59
RFC4P35249 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
RFC4P35249 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RFC4P35249 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RFC4P35249 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
RFC4P35249 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.98■■□□□ 1.59
RFC4P35249 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RFC4P35249 MFAP1P1-201ENST00000442257 1255 ntBASIC24.98■■□□□ 1.59
RFC4P35249 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RFC4P35249 TOLLIP-AS1-201ENST00000530897 939 ntBASIC24.98■■□□□ 1.59
RFC4P35249 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC24.98■■□□□ 1.59
RFC4P35249 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RFC4P35249 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC24.98■■□□□ 1.59
RFC4P35249 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC24.98■■□□□ 1.59
RFC4P35249 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
RFC4P35249 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
RFC4P35249 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RFC4P35249 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.98■■□□□ 1.59
RFC4P35249 AC005229.4-201ENST00000610085 2198 ntBASIC24.97■■□□□ 1.59
RFC4P35249 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC24.97■■□□□ 1.59
RFC4P35249 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RFC4P35249 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RFC4P35249 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
RFC4P35249 AC004951.3-201ENST00000418645 1148 ntBASIC24.97■■□□□ 1.59
RFC4P35249 AC092647.4-201ENST00000457211 535 ntBASIC24.97■■□□□ 1.59
RFC4P35249 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RFC4P35249 AP000550.4-202ENST00000639755 178 ntBASIC24.97■■□□□ 1.59
RFC4P35249 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RFC4P35249 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
RFC4P35249 GOLGA6L3-201ENST00000507199 1679 ntBASIC24.97■■□□□ 1.59
RFC4P35249 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RFC4P35249 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC24.97■■□□□ 1.59
RFC4P35249 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RFC4P35249 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RFC4P35249 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
RFC4P35249 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
RFC4P35249 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC24.96■■□□□ 1.59
RFC4P35249 COX11P1-201ENST00000489116 835 ntBASIC24.96■■□□□ 1.59
RFC4P35249 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
RFC4P35249 KRT126P-201ENST00000549467 1181 ntBASIC24.96■■□□□ 1.59
RFC4P35249 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC24.96■■□□□ 1.59
RFC4P35249 DBP-204ENST00000599385 709 ntTSL 3 BASIC24.96■■□□□ 1.59
RFC4P35249 AL121894.2-201ENST00000602977 491 ntBASIC24.96■■□□□ 1.59
RFC4P35249 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC24.96■■□□□ 1.59
RFC4P35249 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
RFC4P35249 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC24.96■■□□□ 1.59
RFC4P35249 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RFC4P35249 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
RFC4P35249 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RFC4P35249 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RFC4P35249 KRT16P6-202ENST00000425692 1426 ntBASIC24.95■■□□□ 1.59
RFC4P35249 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RFC4P35249 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.59
RFC4P35249 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
RFC4P35249 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.59
RFC4P35249 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RFC4P35249 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.95■■□□□ 1.58
RFC4P35249 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC24.95■■□□□ 1.58
RFC4P35249 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RFC4P35249 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RFC4P35249 SLC25A1P2-201ENST00000430693 912 ntBASIC24.95■■□□□ 1.58
RFC4P35249 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
RFC4P35249 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC24.95■■□□□ 1.58
RFC4P35249 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
RFC4P35249 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RFC4P35249 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RFC4P35249 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.95■■□□□ 1.58
RFC4P35249 DPP3P2-201ENST00000416030 1696 ntBASIC24.94■■□□□ 1.58
RFC4P35249 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
RFC4P35249 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RFC4P35249 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RFC4P35249 AC096733.2-201ENST00000609937 1394 ntBASIC24.94■■□□□ 1.58
RFC4P35249 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RFC4P35249 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
RFC4P35249 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
RFC4P35249 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RFC4P35249 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.94■■□□□ 1.58
RFC4P35249 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RFC4P35249 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RFC4P35249 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RFC4P35249 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC24.94■■□□□ 1.58
RFC4P35249 CD70-202ENST00000423145 881 ntTSL 2 BASIC24.94■■□□□ 1.58
RFC4P35249 AC009947.2-201ENST00000444014 672 ntBASIC24.94■■□□□ 1.58
RFC4P35249 FAM207BP-201ENST00000447172 505 ntBASIC24.94■■□□□ 1.58
RFC4P35249 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RFC4P35249 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
RFC4P35249 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC24.94■■□□□ 1.58
RFC4P35249 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms