Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL4A5P29400 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL4A5P29400 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.95■■□□□ 1.42
COL4A5P29400 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.95■■□□□ 1.42
COL4A5P29400 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
COL4A5P29400 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL4A5P29400 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL4A5P29400 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
COL4A5P29400 PCED1CP-201ENST00000419887 785 ntBASIC23.95■■□□□ 1.42
COL4A5P29400 TSPY5P-201ENST00000426936 936 ntBASIC23.95■■□□□ 1.42
COL4A5P29400 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL4A5P29400 AC130371.2-201ENST00000619443 611 ntBASIC23.95■■□□□ 1.42
COL4A5P29400 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
COL4A5P29400 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL4A5P29400 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL4A5P29400 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
COL4A5P29400 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL4A5P29400 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.94■■□□□ 1.42
COL4A5P29400 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
COL4A5P29400 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC23.94■■□□□ 1.42
COL4A5P29400 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC23.94■■□□□ 1.42
COL4A5P29400 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
COL4A5P29400 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL4A5P29400 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
COL4A5P29400 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
COL4A5P29400 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.94■■□□□ 1.42
COL4A5P29400 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL4A5P29400 FAM207BP-201ENST00000447172 505 ntBASIC23.93■■□□□ 1.42
COL4A5P29400 AL359075.1-203ENST00000462729 1002 ntBASIC23.93■■□□□ 1.42
COL4A5P29400 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.93■■□□□ 1.42
COL4A5P29400 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
COL4A5P29400 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC23.93■■□□□ 1.42
COL4A5P29400 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.93■■□□□ 1.42
COL4A5P29400 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC23.93■■□□□ 1.42
COL4A5P29400 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC23.93■■□□□ 1.42
COL4A5P29400 AC141257.4-201ENST00000634557 245 ntBASIC23.93■■□□□ 1.42
COL4A5P29400 AC136944.6-201ENST00000634818 245 ntBASIC23.93■■□□□ 1.42
COL4A5P29400 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
COL4A5P29400 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL4A5P29400 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL4A5P29400 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
COL4A5P29400 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC23.93■■□□□ 1.42
COL4A5P29400 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.93■■□□□ 1.42
COL4A5P29400 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
COL4A5P29400 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL4A5P29400 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL4A5P29400 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.92■■□□□ 1.42
COL4A5P29400 COX11P1-201ENST00000489116 835 ntBASIC23.92■■□□□ 1.42
COL4A5P29400 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC23.92■■□□□ 1.42
COL4A5P29400 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.92■■□□□ 1.42
COL4A5P29400 DBP-204ENST00000599385 709 ntTSL 3 BASIC23.92■■□□□ 1.42
COL4A5P29400 AL121956.5-201ENST00000625261 221 ntBASIC23.92■■□□□ 1.42
COL4A5P29400 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL4A5P29400 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL4A5P29400 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL4A5P29400 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL4A5P29400 AC092338.2-201ENST00000568827 1415 ntBASIC23.92■■□□□ 1.42
COL4A5P29400 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL4A5P29400 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.92■■□□□ 1.42
COL4A5P29400 TUBB8P6-201ENST00000436895 1288 ntBASIC23.92■■□□□ 1.42
COL4A5P29400 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL4A5P29400 Z85996.1-201ENST00000494644 937 ntBASIC23.92■■□□□ 1.42
COL4A5P29400 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC23.92■■□□□ 1.42
COL4A5P29400 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL4A5P29400 AC093458.2-201ENST00000623150 629 ntBASIC23.92■■□□□ 1.42
COL4A5P29400 AC011558.1-201ENST00000623459 338 ntBASIC23.92■■□□□ 1.42
COL4A5P29400 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.91■■□□□ 1.42
COL4A5P29400 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.91■■□□□ 1.42
COL4A5P29400 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
COL4A5P29400 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
COL4A5P29400 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL4A5P29400 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL4A5P29400 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
COL4A5P29400 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
COL4A5P29400 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC23.91■■□□□ 1.42
COL4A5P29400 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC23.91■■□□□ 1.42
COL4A5P29400 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23.91■■□□□ 1.42
COL4A5P29400 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL4A5P29400 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL4A5P29400 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.91■■□□□ 1.42
COL4A5P29400 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC23.9■■□□□ 1.42
COL4A5P29400 PLK5-205ENST00000642079 1969 ntBASIC23.9■■□□□ 1.42
COL4A5P29400 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
COL4A5P29400 ANKRD20A18P-201ENST00000359341 492 ntBASIC23.9■■□□□ 1.42
COL4A5P29400 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC23.9■■□□□ 1.42
COL4A5P29400 AC004951.3-201ENST00000418645 1148 ntBASIC23.9■■□□□ 1.42
COL4A5P29400 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC23.9■■□□□ 1.42
COL4A5P29400 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL4A5P29400 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC23.9■■□□□ 1.42
COL4A5P29400 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC23.9■■□□□ 1.42
COL4A5P29400 AC116407.4-201ENST00000623319 1061 ntBASIC23.9■■□□□ 1.42
COL4A5P29400 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
COL4A5P29400 AC005332.1-201ENST00000577698 1310 ntBASIC23.9■■□□□ 1.42
COL4A5P29400 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL4A5P29400 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.9■■□□□ 1.42
COL4A5P29400 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
COL4A5P29400 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL4A5P29400 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL4A5P29400 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.9■■□□□ 1.42
COL4A5P29400 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms