Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RXRBP28702 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RXRBP28702 MIR574-201ENST00000385209 96 ntBASIC26.17■■□□□ 1.78
RXRBP28702 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RXRBP28702 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RXRBP28702 PTPA-216ENST00000432651 857 ntTSL 2 BASIC26.17■■□□□ 1.78
RXRBP28702 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC26.17■■□□□ 1.78
RXRBP28702 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RXRBP28702 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RXRBP28702 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RXRBP28702 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC26.17■■□□□ 1.78
RXRBP28702 AC016734.2-201ENST00000624325 1377 ntBASIC26.17■■□□□ 1.78
RXRBP28702 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC26.17■■□□□ 1.78
RXRBP28702 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RXRBP28702 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
RXRBP28702 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RXRBP28702 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RXRBP28702 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RXRBP28702 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
RXRBP28702 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC26.16■■□□□ 1.78
RXRBP28702 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
RXRBP28702 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
RXRBP28702 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC26.16■■□□□ 1.78
RXRBP28702 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC26.16■■□□□ 1.78
RXRBP28702 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC26.16■■□□□ 1.78
RXRBP28702 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC26.16■■□□□ 1.78
RXRBP28702 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC26.16■■□□□ 1.78
RXRBP28702 AL121672.3-201ENST00000608644 468 ntBASIC26.16■■□□□ 1.78
RXRBP28702 NME4-212ENST00000621774 904 ntTSL 3 BASIC26.16■■□□□ 1.78
RXRBP28702 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RXRBP28702 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC26.16■■□□□ 1.78
RXRBP28702 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
RXRBP28702 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.15■■□□□ 1.78
RXRBP28702 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RXRBP28702 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
RXRBP28702 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RXRBP28702 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC26.15■■□□□ 1.78
RXRBP28702 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RXRBP28702 MRPL3P1-201ENST00000400109 1033 ntBASIC26.15■■□□□ 1.78
RXRBP28702 AL590627.1-203ENST00000421194 1026 ntBASIC26.15■■□□□ 1.78
RXRBP28702 AP002383.4-201ENST00000442518 975 ntBASIC26.15■■□□□ 1.78
RXRBP28702 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
RXRBP28702 BX276092.5-203ENST00000456199 560 ntBASIC26.15■■□□□ 1.78
RXRBP28702 GCSHP2-201ENST00000560971 527 ntBASIC26.15■■□□□ 1.78
RXRBP28702 AC091304.2-201ENST00000564639 760 ntBASIC26.15■■□□□ 1.78
RXRBP28702 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC26.15■■□□□ 1.78
RXRBP28702 AF228730.7-201ENST00000641842 219 ntBASIC26.15■■□□□ 1.78
RXRBP28702 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
RXRBP28702 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
RXRBP28702 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RXRBP28702 KRT8P36-201ENST00000489121 1440 ntBASIC26.14■■□□□ 1.78
RXRBP28702 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RXRBP28702 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RXRBP28702 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RXRBP28702 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
RXRBP28702 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC26.14■■□□□ 1.78
RXRBP28702 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RXRBP28702 AC092865.5-201ENST00000545435 363 ntBASIC26.14■■□□□ 1.78
RXRBP28702 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
RXRBP28702 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
RXRBP28702 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
RXRBP28702 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.77
RXRBP28702 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
RXRBP28702 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC26.13■■□□□ 1.77
RXRBP28702 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RXRBP28702 BX119927.1-201ENST00000636596 1552 ntBASIC26.13■■□□□ 1.77
RXRBP28702 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RXRBP28702 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
RXRBP28702 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RXRBP28702 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC26.13■■□□□ 1.77
RXRBP28702 SPDYE15P-201ENST00000424157 909 ntBASIC26.13■■□□□ 1.77
RXRBP28702 TUBB8P6-201ENST00000436895 1288 ntBASIC26.13■■□□□ 1.77
RXRBP28702 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
RXRBP28702 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC26.13■■□□□ 1.77
RXRBP28702 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC26.13■■□□□ 1.77
RXRBP28702 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RXRBP28702 LINC01711-201ENST00000598340 967 ntBASIC26.13■■□□□ 1.77
RXRBP28702 CALM3-211ENST00000598871 561 ntTSL 4 BASIC26.13■■□□□ 1.77
RXRBP28702 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC26.13■■□□□ 1.77
RXRBP28702 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC26.13■■□□□ 1.77
RXRBP28702 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RXRBP28702 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RXRBP28702 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC26.13■■□□□ 1.77
RXRBP28702 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RXRBP28702 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.13■■□□□ 1.77
RXRBP28702 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.13■■□□□ 1.77
RXRBP28702 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.12■■□□□ 1.77
RXRBP28702 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
RXRBP28702 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RXRBP28702 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC26.12■■□□□ 1.77
RXRBP28702 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC26.12■■□□□ 1.77
RXRBP28702 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC26.12■■□□□ 1.77
RXRBP28702 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC26.12■■□□□ 1.77
RXRBP28702 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC26.12■■□□□ 1.77
RXRBP28702 CA15P1-201ENST00000481698 905 ntBASIC26.12■■□□□ 1.77
RXRBP28702 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC26.12■■□□□ 1.77
RXRBP28702 AP003041.3-201ENST00000527151 707 ntBASIC26.12■■□□□ 1.77
RXRBP28702 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC26.12■■□□□ 1.77
RXRBP28702 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC26.12■■□□□ 1.77
RXRBP28702 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms