Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
ACKR3P25106 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.19■□□□□ 0.34
ACKR3P25106 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACKR3P25106 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACKR3P25106 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ACKR3P25106 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACKR3P25106 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.18■□□□□ 0.34
ACKR3P25106 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ACKR3P25106 MKRN4P-201ENST00000444706 1521 ntBASIC17.18■□□□□ 0.34
ACKR3P25106 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACKR3P25106 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACKR3P25106 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACKR3P25106 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ACKR3P25106 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
ACKR3P25106 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ACKR3P25106 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
ACKR3P25106 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.18■□□□□ 0.34
ACKR3P25106 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.18■□□□□ 0.34
ACKR3P25106 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACKR3P25106 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.18■□□□□ 0.34
ACKR3P25106 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ACKR3P25106 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
ACKR3P25106 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ACKR3P25106 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
ACKR3P25106 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACKR3P25106 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACKR3P25106 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ACKR3P25106 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACKR3P25106 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.17■□□□□ 0.34
ACKR3P25106 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.17■□□□□ 0.34
ACKR3P25106 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACKR3P25106 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACKR3P25106 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACKR3P25106 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ACKR3P25106 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACKR3P25106 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.17■□□□□ 0.34
ACKR3P25106 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACKR3P25106 LSM12P1-201ENST00000411836 588 ntBASIC17.17■□□□□ 0.34
ACKR3P25106 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.17■□□□□ 0.34
ACKR3P25106 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.17■□□□□ 0.34
ACKR3P25106 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ACKR3P25106 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.17■□□□□ 0.34
ACKR3P25106 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.17■□□□□ 0.34
ACKR3P25106 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACKR3P25106 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.17■□□□□ 0.34
ACKR3P25106 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.17■□□□□ 0.34
ACKR3P25106 AC087289.5-201ENST00000586076 3175 ntBASIC17.17■□□□□ 0.34
ACKR3P25106 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
ACKR3P25106 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACKR3P25106 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ACKR3P25106 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACKR3P25106 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACKR3P25106 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACKR3P25106 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACKR3P25106 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.16■□□□□ 0.34
ACKR3P25106 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACKR3P25106 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACKR3P25106 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACKR3P25106 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ACKR3P25106 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.16■□□□□ 0.34
ACKR3P25106 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.16■□□□□ 0.34
ACKR3P25106 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ACKR3P25106 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ACKR3P25106 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ACKR3P25106 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACKR3P25106 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.16■□□□□ 0.34
ACKR3P25106 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ACKR3P25106 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.16■□□□□ 0.34
ACKR3P25106 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ACKR3P25106 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.16■□□□□ 0.34
ACKR3P25106 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ACKR3P25106 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.15■□□□□ 0.34
ACKR3P25106 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACKR3P25106 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACKR3P25106 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
ACKR3P25106 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ACKR3P25106 KRT16P6-202ENST00000425692 1426 ntBASIC17.15■□□□□ 0.34
ACKR3P25106 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.15■□□□□ 0.34
ACKR3P25106 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.15■□□□□ 0.34
ACKR3P25106 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACKR3P25106 BX276092.2-201ENST00000417668 665 ntBASIC17.15■□□□□ 0.34
ACKR3P25106 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.15■□□□□ 0.34
ACKR3P25106 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACKR3P25106 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.15■□□□□ 0.34
ACKR3P25106 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.15■□□□□ 0.34
ACKR3P25106 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ACKR3P25106 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ACKR3P25106 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACKR3P25106 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACKR3P25106 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.15■□□□□ 0.34
ACKR3P25106 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ACKR3P25106 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACKR3P25106 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACKR3P25106 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACKR3P25106 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACKR3P25106 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACKR3P25106 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ACKR3P25106 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ACKR3P25106 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ACKR3P25106 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms