Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 EIF4G2-214ENST00000530211 591 ntTSL 211.27□□□□□ -0.611e-7■■■■□ 22.8
RPS3P23396 CIZ1-207ENST00000393608 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.613e-11■■■■□ 22.8
RPS3P23396 OGFOD1-206ENST00000565682 567 ntTSL 411.15□□□□□ -0.624e-6■■■■□ 22.8
RPS3P23396 RFXANK-206ENST00000535017 546 ntTSL 311.04□□□□□ -0.644e-6■■■■□ 22.8
RPS3P23396 OGFOD1-207ENST00000566157 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.664e-6■■■■□ 22.8
RPS3P23396 MAP4-208ENST00000429422 3724 ntTSL 1 (best)10.92□□□□□ -0.663e-11■■■■□ 22.8
RPS3P23396 OGFOD1-210ENST00000569645 642 ntTSL 210.88□□□□□ -0.674e-6■■■■□ 22.8
RPS3P23396 OGFOD1-203ENST00000562150 586 ntTSL 410.82□□□□□ -0.684e-6■■■■□ 22.8
RPS3P23396 TOR1AIP1-208ENST00000528443 3685 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.712e-7■■■■□ 22.8
RPS3P23396 CIZ1-208ENST00000415526 2508 ntAPPRIS ALT2 TSL 1 (best)10.39□□□□□ -0.753e-11■■■■□ 22.8
RPS3P23396 CYBRD1-201ENST00000321348 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.824e-6■■■■□ 22.8
RPS3P23396 PTPA-212ENST00000417728 967 ntTSL 39.88□□□□□ -0.834e-6■■■■□ 22.8
RPS3P23396 EIF4G2-219ENST00000531507 591 ntTSL 59.82□□□□□ -0.841e-7■■■■□ 22.8
RPS3P23396 BABAM1-209ENST00000598382 424 ntTSL 29.67□□□□□ -0.864e-6■■■■□ 22.8
RPS3P23396 ANKZF1-209ENST00000460966 873 ntTSL 1 (best)9.62□□□□□ -0.874e-6■■■■□ 22.8
RPS3P23396 MRPL15-202ENST00000519831 601 ntTSL 29.57□□□□□ -0.884e-7■■■■□ 22.8
RPS3P23396 TOR1AIP1-210ENST00000531630 579 ntTSL 59.57□□□□□ -0.882e-7■■■■□ 22.8
RPS3P23396 RSL24D1-206ENST00000569386 442 ntTSL 39.5□□□□□ -0.894e-6■■■■□ 22.8
RPS3P23396 TOR1AIP1-206ENST00000527391 593 ntTSL 59.47□□□□□ -0.892e-7■■■■□ 22.8
RPS3P23396 MAP4-205ENST00000420772 3478 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.93e-11■■■■□ 22.8
RPS3P23396 EIF4G2-226ENST00000532570 573 ntTSL 59.37□□□□□ -0.911e-7■■■■□ 22.8
RPS3P23396 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC9.13□□□□□ -0.951e-6■■■■□ 22.8
RPS3P23396 ARNT-208ENST00000505755 2427 ntTSL 2 BASIC9.09□□□□□ -0.954e-6■■■■□ 22.8
RPS3P23396 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.971e-7■■■■□ 22.8
RPS3P23396 OGFOD1-201ENST00000336111 2415 ntTSL 28.99□□□□□ -0.974e-6■■■■□ 22.8
RPS3P23396 RSL24D1-202ENST00000562895 435 ntTSL 38.97□□□□□ -0.974e-6■■■■□ 22.8
RPS3P23396 NUP98-207ENST00000429801 2541 ntTSL 1 (best)8.43□□□□□ -1.066e-8■■■■□ 22.8
RPS3P23396 MKNK2-211ENST00000591142 875 ntTSL 2 BASIC8.08□□□□□ -1.124e-6■■■■□ 22.8
RPS3P23396 OGFOD1-202ENST00000561646 584 ntTSL 28□□□□□ -1.134e-6■■■■□ 22.8
RPS3P23396 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.132e-7■■■■□ 22.8
RPS3P23396 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC7.98□□□□□ -1.136e-8■■■■□ 22.8
RPS3P23396 CIZ1-212ENST00000471773 717 ntTSL 27.79□□□□□ -1.163e-11■■■■□ 22.8
RPS3P23396 CIZ1-210ENST00000461765 677 ntTSL 37.47□□□□□ -1.213e-11■■■■□ 22.8
RPS3P23396 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.34e-6■■■■□ 22.8
RPS3P23396 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.04□□□□□ -1.444e-6■■■■□ 22.8
RPS3P23396 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.512e-7■■■■□ 22.8
RPS3P23396 EIF4G2-206ENST00000525972 584 ntTSL 25.5□□□□□ -1.531e-7■■■■□ 22.8
RPS3P23396 OGFOD1-211ENST00000569802 474 ntTSL 44.08□□□□□ -1.764e-6■■■■□ 22.8
RPS3P23396 EIF4G2-212ENST00000528562 601 ntTSL 43.97□□□□□ -1.771e-7■■■■□ 22.8
RPS3P23396 EPHX1-205ENST00000467015 455 ntTSL 20.58□□□□□ -2.324e-19■■■■□ 22.8
RPS3P23396 SNRPF-203ENST00000551316 787 ntTSL 212.11□□□□□ -0.473e-17■■■■□ 22.8
RPS3P23396 EPHX2-211ENST00000523326 557 ntTSL 217.06■□□□□ 0.327e-7■■■■□ 22.8
RPS3P23396 EPHX2-208ENST00000521684 935 ntTSL 314.68□□□□□ -0.067e-7■■■■□ 22.8
RPS3P23396 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.32■■□□□ 1.483e-20■■■■□ 22.8
RPS3P23396 HSD17B12-212ENST00000636722 540 ntTSL 419.52■□□□□ 0.723e-20■■■■□ 22.8
RPS3P23396 RAN-206ENST00000535090 657 ntTSL 54.03□□□□□ -1.761e-8■■■■□ 22.8
RPS3P23396 C2-217ENST00000497706 1609 ntTSL 514.66□□□□□ -0.062e-7■■■■□ 22.8
RPS3P23396 TMEM45B-202ENST00000524567 1639 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.892e-6■■■■□ 22.8
RPS3P23396 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.24■□□□□ 0.193e-7■■■■□ 22.8
RPS3P23396 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.253e-7■■■■□ 22.8
RPS3P23396 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.463e-7■■■■□ 22.8
RPS3P23396 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.523e-7■■■■□ 22.8
RPS3P23396 CTNNB1-204ENST00000405570 2513 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.873e-7■■■■□ 22.8
RPS3P23396 GANAB-207ENST00000526732 824 ntTSL 212.29□□□□□ -0.441e-10■■■■□ 22.8
RPS3P23396 MBNL3-211ENST00000473364 780 ntTSL 34.39□□□□□ -1.715e-7■■■■□ 22.8
RPS3P23396 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.864e-6■■■■□ 22.8
RPS3P23396 BORCS8-MEF2B-201ENST00000354191 1695 ntTSL 218.95■□□□□ 0.624e-6■■■■□ 22.8
RPS3P23396 BORCS8-MEF2B-207ENST00000602804 1804 ntTSL 218.09■□□□□ 0.494e-6■■■■□ 22.8
RPS3P23396 CARS-204ENST00000439280 1021 ntTSL 316.98■□□□□ 0.314e-6■■■■□ 22.8
RPS3P23396 BORCS8-MEF2B-208ENST00000630940 1664 ntTSL 216.34■□□□□ 0.214e-6■■■■□ 22.8
RPS3P23396 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.81■□□□□ 0.124e-6■■■■□ 22.8
RPS3P23396 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.044e-6■■■■□ 22.8
RPS3P23396 BORCS8-MEF2B-204ENST00000602276 708 ntTSL 514.81□□□□□ -0.044e-6■■■■□ 22.8
RPS3P23396 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.134e-6■■■■□ 22.8
RPS3P23396 BORCS8-MEF2B-205ENST00000602438 576 ntTSL 413.18□□□□□ -0.34e-6■■■■□ 22.8
RPS3P23396 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.32e-6■■■■□ 22.8
RPS3P23396 BORCS8-204ENST00000488252 3149 ntTSL 212.46□□□□□ -0.424e-6■■■■□ 22.8
RPS3P23396 CARS-213ENST00000527330 564 ntTSL 412.45□□□□□ -0.424e-6■■■■□ 22.8
RPS3P23396 CARS-211ENST00000524825 550 ntTSL 412.41□□□□□ -0.424e-6■■■■□ 22.8
RPS3P23396 BORCS8-209ENST00000591566 3698 nt11.56□□□□□ -0.564e-6■■■■□ 22.8
RPS3P23396 BORCS8-205ENST00000494489 877 ntTSL 310.3□□□□□ -0.764e-6■■■■□ 22.8
RPS3P23396 BORCS8-MEF2B-206ENST00000602689 554 ntTSL 310.22□□□□□ -0.774e-6■■■■□ 22.8
RPS3P23396 CARS-205ENST00000465207 422 ntTSL 59.11□□□□□ -0.954e-6■■■■□ 22.8
RPS3P23396 BORCS8-207ENST00000588208 457 ntTSL 38.94□□□□□ -0.984e-6■■■■□ 22.8
RPS3P23396 FEN1-203ENST00000535723 776 ntTSL 314.12□□□□□ -0.151e-8■■■■□ 22.8
RPS3P23396 MCM2-203ENST00000468659 557 ntTSL 420.51■□□□□ 0.876e-8■■■■□ 22.8
RPS3P23396 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -12e-7■■■■□ 22.8
RPS3P23396 TMEM2-210ENST00000542935 5372 ntTSL 1 (best)7.9□□□□□ -1.142e-7■■■■□ 22.8
RPS3P23396 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.352e-7■■■■□ 22.8
RPS3P23396 PPIF-202ENST00000448165 821 ntTSL 214.93□□□□□ -0.022e-7■■■■□ 22.8
RPS3P23396 NDUFS2-211ENST00000483804 1062 ntTSL 511.63□□□□□ -0.554e-7■■■■□ 22.8
RPS3P23396 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.064e-8■■■■□ 22.8
RPS3P23396 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.064e-8■■■■□ 22.8
RPS3P23396 OAT-205ENST00000483711 570 ntTSL 54.69□□□□□ -1.667e-7■■■■□ 22.8
RPS3P23396 GOT1-201ENST00000370508 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.646e-7■■■■□ 22.8
RPS3P23396 EIF3I-205ENST00000483517 744 ntTSL 512.37□□□□□ -0.432e-8■■■■□ 22.8
RPS3P23396 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.74■■□□□ 1.394e-6■■■■□ 22.8
RPS3P23396 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.28■■□□□ 1.324e-6■■■■□ 22.8
RPS3P23396 PRMT5-205ENST00000421938 565 ntTSL 321.22■□□□□ 0.999e-9■■■■□ 22.8
RPS3P23396 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.934e-6■■■■□ 22.8
RPS3P23396 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.894e-6■■■■□ 22.8
RPS3P23396 SHISA5-204ENST00000417962 2306 ntTSL 218.49■□□□□ 0.554e-6■■■■□ 22.8
RPS3P23396 EIF2B3-202ENST00000372182 705 ntTSL 318.4■□□□□ 0.544e-6■■■■□ 22.8
RPS3P23396 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.39■□□□□ 0.534e-6■■■■□ 22.8
RPS3P23396 SHISA5-203ENST00000417841 575 ntTSL 418.18■□□□□ 0.54e-6■■■■□ 22.8
RPS3P23396 DNAJB1-211ENST00000601533 573 ntTSL 217.87■□□□□ 0.452e-6■■■■□ 22.8
RPS3P23396 MAGEA3-202ENST00000417212 853 ntTSL 217.86■□□□□ 0.454e-6■■■■□ 22.8
RPS3P23396 SHISA5-214ENST00000486344 713 ntTSL 217.72■□□□□ 0.434e-6■■■■□ 22.8
RPS3P23396 PRMT1-218ENST00000534280 766 ntTSL 317.68■□□□□ 0.423e-11■■■■□ 22.8
RPS3P23396 DNAJB1-208ENST00000598235 882 ntTSL 517.64■□□□□ 0.414e-6■■■■□ 22.8
Retrieved 100 of 24,271 protein–RNA pairs in 240.8 ms