Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERCC2P18074 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ERCC2P18074 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.4■□□□□ 0.86
ERCC2P18074 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ERCC2P18074 AC008687.6-201ENST00000596318 630 ntBASIC20.4■□□□□ 0.86
ERCC2P18074 AC018553.1-201ENST00000616682 1458 ntBASIC20.4■□□□□ 0.86
ERCC2P18074 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.4■□□□□ 0.86
ERCC2P18074 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ERCC2P18074 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
ERCC2P18074 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.4■□□□□ 0.86
ERCC2P18074 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ERCC2P18074 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ERCC2P18074 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.39■□□□□ 0.86
ERCC2P18074 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ERCC2P18074 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.39■□□□□ 0.85
ERCC2P18074 AC116351.2-201ENST00000606540 1585 ntBASIC20.39■□□□□ 0.85
ERCC2P18074 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.39■□□□□ 0.85
ERCC2P18074 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
ERCC2P18074 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ERCC2P18074 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ERCC2P18074 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
ERCC2P18074 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ERCC2P18074 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.39■□□□□ 0.85
ERCC2P18074 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.39■□□□□ 0.85
ERCC2P18074 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.39■□□□□ 0.85
ERCC2P18074 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.39■□□□□ 0.85
ERCC2P18074 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
ERCC2P18074 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ERCC2P18074 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ERCC2P18074 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.39■□□□□ 0.85
ERCC2P18074 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
ERCC2P18074 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
ERCC2P18074 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.39■□□□□ 0.85
ERCC2P18074 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.38■□□□□ 0.85
ERCC2P18074 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERCC2P18074 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERCC2P18074 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.38■□□□□ 0.85
ERCC2P18074 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERCC2P18074 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERCC2P18074 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERCC2P18074 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.38■□□□□ 0.85
ERCC2P18074 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ERCC2P18074 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.38■□□□□ 0.85
ERCC2P18074 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
ERCC2P18074 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.38■□□□□ 0.85
ERCC2P18074 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERCC2P18074 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ERCC2P18074 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERCC2P18074 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.38■□□□□ 0.85
ERCC2P18074 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ERCC2P18074 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.38■□□□□ 0.85
ERCC2P18074 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
ERCC2P18074 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.37■□□□□ 0.85
ERCC2P18074 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ERCC2P18074 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.37■□□□□ 0.85
ERCC2P18074 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
ERCC2P18074 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.37■□□□□ 0.85
ERCC2P18074 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.37■□□□□ 0.85
ERCC2P18074 AC008403.3-201ENST00000598924 454 ntBASIC20.37■□□□□ 0.85
ERCC2P18074 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.37■□□□□ 0.85
ERCC2P18074 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ERCC2P18074 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.37■□□□□ 0.85
ERCC2P18074 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ERCC2P18074 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.37■□□□□ 0.85
ERCC2P18074 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC2P18074 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC2P18074 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.36■□□□□ 0.85
ERCC2P18074 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC2P18074 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC2P18074 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC2P18074 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
ERCC2P18074 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC2P18074 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC2P18074 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.36■□□□□ 0.85
ERCC2P18074 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ERCC2P18074 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.36■□□□□ 0.85
ERCC2P18074 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
ERCC2P18074 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.36■□□□□ 0.85
ERCC2P18074 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms