Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN1P18031 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTPN1P18031 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN1P18031 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN1P18031 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21■□□□□ 0.95
PTPN1P18031 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTPN1P18031 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTPN1P18031 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN1P18031 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN1P18031 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN1P18031 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN1P18031 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PTPN1P18031 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN1P18031 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.99■□□□□ 0.95
PTPN1P18031 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN1P18031 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN1P18031 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.99■□□□□ 0.95
PTPN1P18031 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN1P18031 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPN1P18031 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPN1P18031 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN1P18031 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN1P18031 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN1P18031 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN1P18031 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPN1P18031 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN1P18031 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN1P18031 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN1P18031 AL691432.2-201ENST00000607222 2038 ntBASIC20.99■□□□□ 0.95
PTPN1P18031 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN1P18031 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.98■□□□□ 0.95
PTPN1P18031 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN1P18031 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PTPN1P18031 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.98■□□□□ 0.95
PTPN1P18031 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN1P18031 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PTPN1P18031 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.98■□□□□ 0.95
PTPN1P18031 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.98■□□□□ 0.95
PTPN1P18031 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PTPN1P18031 AC093827.2-201ENST00000512654 315 ntBASIC20.98■□□□□ 0.95
PTPN1P18031 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.98■□□□□ 0.95
PTPN1P18031 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.98■□□□□ 0.95
PTPN1P18031 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN1P18031 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.98■□□□□ 0.95
PTPN1P18031 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.98■□□□□ 0.95
PTPN1P18031 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN1P18031 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN1P18031 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN1P18031 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN1P18031 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
PTPN1P18031 LINC01521-201ENST00000504184 1943 ntBASIC20.98■□□□□ 0.95
PTPN1P18031 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN1P18031 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN1P18031 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.97■□□□□ 0.95
PTPN1P18031 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN1P18031 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN1P18031 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
PTPN1P18031 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.97■□□□□ 0.95
PTPN1P18031 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN1P18031 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN1P18031 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN1P18031 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN1P18031 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN1P18031 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN1P18031 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN1P18031 AC008550.1-201ENST00000511500 884 ntBASIC20.97■□□□□ 0.95
PTPN1P18031 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN1P18031 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN1P18031 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN1P18031 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN1P18031 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN1P18031 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.97■□□□□ 0.95
PTPN1P18031 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN1P18031 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.97■□□□□ 0.95
PTPN1P18031 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PTPN1P18031 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN1P18031 AC073130.3-201ENST00000624389 2278 ntBASIC20.97■□□□□ 0.95
PTPN1P18031 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN1P18031 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN1P18031 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN1P18031 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN1P18031 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN1P18031 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN1P18031 AP006587.1-201ENST00000534129 1502 ntBASIC20.96■□□□□ 0.95
PTPN1P18031 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.96■□□□□ 0.95
PTPN1P18031 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN1P18031 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPN1P18031 KRT16P5-201ENST00000455284 522 ntBASIC20.96■□□□□ 0.95
PTPN1P18031 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.96■□□□□ 0.95
PTPN1P18031 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN1P18031 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN1P18031 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.96■□□□□ 0.95
PTPN1P18031 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPN1P18031 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN1P18031 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPN1P18031 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
PTPN1P18031 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
PTPN1P18031 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN1P18031 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
PTPN1P18031 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms