Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.29■□□□□ 0.52
PRKCAP17252 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PRKCAP17252 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRKCAP17252 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
PRKCAP17252 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.29■□□□□ 0.52
PRKCAP17252 AC091874.3-201ENST00000512672 1195 ntBASIC18.29■□□□□ 0.52
PRKCAP17252 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.29■□□□□ 0.52
PRKCAP17252 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRKCAP17252 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRKCAP17252 AC098934.4-201ENST00000564127 592 ntBASIC18.29■□□□□ 0.52
PRKCAP17252 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.29■□□□□ 0.52
PRKCAP17252 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.29■□□□□ 0.52
PRKCAP17252 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PRKCAP17252 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRKCAP17252 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRKCAP17252 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRKCAP17252 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.29■□□□□ 0.52
PRKCAP17252 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PRKCAP17252 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRKCAP17252 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRKCAP17252 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PRKCAP17252 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRKCAP17252 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.28■□□□□ 0.52
PRKCAP17252 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRKCAP17252 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.28■□□□□ 0.52
PRKCAP17252 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRKCAP17252 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.28■□□□□ 0.52
PRKCAP17252 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRKCAP17252 AL355802.2-201ENST00000402069 882 ntBASIC18.28■□□□□ 0.52
PRKCAP17252 AC073210.2-201ENST00000430369 194 ntBASIC18.28■□□□□ 0.52
PRKCAP17252 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRKCAP17252 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.28■□□□□ 0.52
PRKCAP17252 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.28■□□□□ 0.52
PRKCAP17252 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRKCAP17252 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PRKCAP17252 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRKCAP17252 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.28■□□□□ 0.52
PRKCAP17252 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRKCAP17252 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PRKCAP17252 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.28■□□□□ 0.52
PRKCAP17252 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRKCAP17252 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRKCAP17252 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRKCAP17252 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.27■□□□□ 0.52
PRKCAP17252 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRKCAP17252 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRKCAP17252 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PRKCAP17252 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.27■□□□□ 0.52
PRKCAP17252 AC069152.1-201ENST00000438030 544 ntBASIC18.27■□□□□ 0.52
PRKCAP17252 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.27■□□□□ 0.52
PRKCAP17252 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.27■□□□□ 0.52
PRKCAP17252 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PRKCAP17252 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
PRKCAP17252 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRKCAP17252 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.27■□□□□ 0.52
PRKCAP17252 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRKCAP17252 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.27■□□□□ 0.52
PRKCAP17252 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRKCAP17252 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.27■□□□□ 0.52
PRKCAP17252 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.27■□□□□ 0.51
PRKCAP17252 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PRKCAP17252 PTBP1P-201ENST00000554374 1601 ntBASIC18.27■□□□□ 0.51
PRKCAP17252 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PRKCAP17252 AFG3L1P-217ENST00000557444 2447 ntBASIC18.27■□□□□ 0.51
PRKCAP17252 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PRKCAP17252 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PRKCAP17252 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRKCAP17252 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PRKCAP17252 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRKCAP17252 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.26■□□□□ 0.51
PRKCAP17252 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
PRKCAP17252 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
PRKCAP17252 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.26■□□□□ 0.51
PRKCAP17252 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRKCAP17252 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PRKCAP17252 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRKCAP17252 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.26■□□□□ 0.51
PRKCAP17252 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PRKCAP17252 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PRKCAP17252 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.26■□□□□ 0.51
PRKCAP17252 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.26■□□□□ 0.51
PRKCAP17252 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.26■□□□□ 0.51
PRKCAP17252 MYC-209ENST00000641252 345 ntBASIC18.26■□□□□ 0.51
PRKCAP17252 AC133041.1-202ENST00000642053 222 ntBASIC18.26■□□□□ 0.51
PRKCAP17252 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRKCAP17252 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PRKCAP17252 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRKCAP17252 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRKCAP17252 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRKCAP17252 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRKCAP17252 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PRKCAP17252 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRKCAP17252 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.26■□□□□ 0.51
PRKCAP17252 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PRKCAP17252 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRKCAP17252 AIRN-201ENST00000601203 4374 ntBASIC18.26■□□□□ 0.51
PRKCAP17252 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRKCAP17252 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PRKCAP17252 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PRKCAP17252 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms