Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.5■□□□□ 0.71
RBP1P09455 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.5■□□□□ 0.71
RBP1P09455 AC026271.2-201ENST00000428091 497 ntBASIC19.5■□□□□ 0.71
RBP1P09455 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.5■□□□□ 0.71
RBP1P09455 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RBP1P09455 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RBP1P09455 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RBP1P09455 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RBP1P09455 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RBP1P09455 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RBP1P09455 AC010980.2-201ENST00000587099 1412 ntBASIC19.5■□□□□ 0.71
RBP1P09455 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.5■□□□□ 0.71
RBP1P09455 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RBP1P09455 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RBP1P09455 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RBP1P09455 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RBP1P09455 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RBP1P09455 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RBP1P09455 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RBP1P09455 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RBP1P09455 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RBP1P09455 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RBP1P09455 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.49■□□□□ 0.71
RBP1P09455 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RBP1P09455 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RBP1P09455 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RBP1P09455 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RBP1P09455 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RBP1P09455 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RBP1P09455 AL512625.2-201ENST00000417533 625 ntBASIC19.49■□□□□ 0.71
RBP1P09455 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RBP1P09455 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.49■□□□□ 0.71
RBP1P09455 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.49■□□□□ 0.71
RBP1P09455 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.49■□□□□ 0.71
RBP1P09455 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.49■□□□□ 0.71
RBP1P09455 PHGDH-210ENST00000641115 1638 ntBASIC19.49■□□□□ 0.71
RBP1P09455 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.49■□□□□ 0.71
RBP1P09455 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RBP1P09455 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RBP1P09455 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RBP1P09455 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RBP1P09455 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RBP1P09455 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.49■□□□□ 0.71
RBP1P09455 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RBP1P09455 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RBP1P09455 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RBP1P09455 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.48■□□□□ 0.71
RBP1P09455 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
RBP1P09455 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RBP1P09455 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
RBP1P09455 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RBP1P09455 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RBP1P09455 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.48■□□□□ 0.71
RBP1P09455 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RBP1P09455 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.48■□□□□ 0.71
RBP1P09455 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RBP1P09455 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.48■□□□□ 0.71
RBP1P09455 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.48■□□□□ 0.71
RBP1P09455 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RBP1P09455 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.48■□□□□ 0.71
RBP1P09455 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RBP1P09455 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RBP1P09455 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RBP1P09455 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RBP1P09455 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RBP1P09455 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RBP1P09455 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RBP1P09455 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.48■□□□□ 0.71
RBP1P09455 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RBP1P09455 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RBP1P09455 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.48■□□□□ 0.71
RBP1P09455 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RBP1P09455 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RBP1P09455 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.47■□□□□ 0.71
RBP1P09455 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RBP1P09455 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.47■□□□□ 0.71
RBP1P09455 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RBP1P09455 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RBP1P09455 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RBP1P09455 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.47■□□□□ 0.71
RBP1P09455 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
RBP1P09455 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.47■□□□□ 0.71
RBP1P09455 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RBP1P09455 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RBP1P09455 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.47■□□□□ 0.71
RBP1P09455 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.47■□□□□ 0.71
RBP1P09455 Z82202.1-201ENST00000623446 1880 ntBASIC19.47■□□□□ 0.71
RBP1P09455 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RBP1P09455 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RBP1P09455 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RBP1P09455 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RBP1P09455 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RBP1P09455 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RBP1P09455 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.46■□□□□ 0.71
RBP1P09455 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.46■□□□□ 0.71
RBP1P09455 RARRES2P6-201ENST00000567333 442 ntBASIC19.46■□□□□ 0.71
RBP1P09455 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.46■□□□□ 0.71
RBP1P09455 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RBP1P09455 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RBP1P09455 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms