Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.7■□□□□ 0.74
CAPNS1P04632 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.7■□□□□ 0.74
CAPNS1P04632 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPNS1P04632 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CAPNS1P04632 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPNS1P04632 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
CAPNS1P04632 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPNS1P04632 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPNS1P04632 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CAPNS1P04632 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CAPNS1P04632 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPNS1P04632 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.69■□□□□ 0.74
CAPNS1P04632 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPNS1P04632 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
CAPNS1P04632 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPNS1P04632 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPNS1P04632 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.69■□□□□ 0.74
CAPNS1P04632 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPNS1P04632 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPNS1P04632 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CAPNS1P04632 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CAPNS1P04632 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPNS1P04632 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CAPNS1P04632 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPNS1P04632 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPNS1P04632 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CAPNS1P04632 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CAPNS1P04632 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CAPNS1P04632 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CAPNS1P04632 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CAPNS1P04632 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPNS1P04632 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPNS1P04632 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CAPNS1P04632 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPNS1P04632 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPNS1P04632 PCDHAC2-203ENST00000615316 3011 ntBASIC19.68■□□□□ 0.74
CAPNS1P04632 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CAPNS1P04632 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPNS1P04632 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.68■□□□□ 0.74
CAPNS1P04632 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPNS1P04632 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CAPNS1P04632 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPNS1P04632 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPNS1P04632 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPNS1P04632 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPNS1P04632 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPNS1P04632 MCRIP2P1-201ENST00000394346 511 ntBASIC19.68■□□□□ 0.74
CAPNS1P04632 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPNS1P04632 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPNS1P04632 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPNS1P04632 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPNS1P04632 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.68■□□□□ 0.74
CAPNS1P04632 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPNS1P04632 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.68■□□□□ 0.74
CAPNS1P04632 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.68■□□□□ 0.74
CAPNS1P04632 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.68■□□□□ 0.74
CAPNS1P04632 AL023875.1-201ENST00000640777 796 ntBASIC19.68■□□□□ 0.74
CAPNS1P04632 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPNS1P04632 AC061975.6-201ENST00000579045 1553 ntBASIC19.68■□□□□ 0.74
CAPNS1P04632 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CAPNS1P04632 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CAPNS1P04632 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPNS1P04632 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPNS1P04632 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CAPNS1P04632 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CAPNS1P04632 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.67■□□□□ 0.74
CAPNS1P04632 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CAPNS1P04632 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPNS1P04632 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPNS1P04632 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CAPNS1P04632 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CAPNS1P04632 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPNS1P04632 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.67■□□□□ 0.74
CAPNS1P04632 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.67■□□□□ 0.74
CAPNS1P04632 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPNS1P04632 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CAPNS1P04632 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CAPNS1P04632 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.67■□□□□ 0.74
CAPNS1P04632 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPNS1P04632 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
CAPNS1P04632 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPNS1P04632 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CAPNS1P04632 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CAPNS1P04632 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPNS1P04632 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CAPNS1P04632 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CAPNS1P04632 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPNS1P04632 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CAPNS1P04632 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CAPNS1P04632 KRT18P68-201ENST00000392293 1000 ntBASIC19.66■□□□□ 0.74
CAPNS1P04632 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.66■□□□□ 0.74
CAPNS1P04632 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CAPNS1P04632 PRKY-204ENST00000533551 1019 ntBASIC19.66■□□□□ 0.74
CAPNS1P04632 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
CAPNS1P04632 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.66■□□□□ 0.74
CAPNS1P04632 RARRES2P10-201ENST00000564312 460 ntBASIC19.66■□□□□ 0.74
CAPNS1P04632 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.66■□□□□ 0.74
CAPNS1P04632 AC110285.5-201ENST00000611501 352 ntBASIC19.66■□□□□ 0.74
CAPNS1P04632 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.66■□□□□ 0.74
CAPNS1P04632 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms