Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.69■□□□□ 0.42
CLDN1O95832 AC026396.1-201ENST00000419388 421 ntBASIC17.69■□□□□ 0.42
CLDN1O95832 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.69■□□□□ 0.42
CLDN1O95832 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.69■□□□□ 0.42
CLDN1O95832 AL356652.1-201ENST00000615962 565 ntBASIC17.69■□□□□ 0.42
CLDN1O95832 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.69■□□□□ 0.42
CLDN1O95832 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.69■□□□□ 0.42
CLDN1O95832 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CLDN1O95832 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 AC026310.3-201ENST00000625186 2373 ntBASIC17.69■□□□□ 0.42
CLDN1O95832 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLDN1O95832 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CLDN1O95832 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CLDN1O95832 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN1O95832 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN1O95832 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CLDN1O95832 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN1O95832 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN1O95832 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN1O95832 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN1O95832 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN1O95832 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN1O95832 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.68■□□□□ 0.42
CLDN1O95832 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN1O95832 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.68■□□□□ 0.42
CLDN1O95832 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.68■□□□□ 0.42
CLDN1O95832 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.68■□□□□ 0.42
CLDN1O95832 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.68■□□□□ 0.42
CLDN1O95832 AC022616.7-201ENST00000525383 220 ntBASIC17.68■□□□□ 0.42
CLDN1O95832 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN1O95832 CR392000.1-201ENST00000624770 1228 ntBASIC17.68■□□□□ 0.42
CLDN1O95832 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.68■□□□□ 0.42
CLDN1O95832 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN1O95832 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN1O95832 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CLDN1O95832 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN1O95832 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.68■□□□□ 0.42
CLDN1O95832 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CLDN1O95832 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN1O95832 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLDN1O95832 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN1O95832 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CLDN1O95832 AC244015.2-201ENST00000616358 1861 ntBASIC17.67■□□□□ 0.42
CLDN1O95832 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN1O95832 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN1O95832 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN1O95832 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN1O95832 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN1O95832 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN1O95832 AC027702.1-201ENST00000563810 1770 ntBASIC17.67■□□□□ 0.42
CLDN1O95832 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN1O95832 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN1O95832 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN1O95832 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.67■□□□□ 0.42
CLDN1O95832 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLDN1O95832 KRT18P48-201ENST00000434763 852 ntBASIC17.67■□□□□ 0.42
CLDN1O95832 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.67■□□□□ 0.42
CLDN1O95832 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.67■□□□□ 0.42
CLDN1O95832 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.67■□□□□ 0.42
CLDN1O95832 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN1O95832 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLDN1O95832 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.67■□□□□ 0.42
CLDN1O95832 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CLDN1O95832 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN1O95832 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN1O95832 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.66■□□□□ 0.42
CLDN1O95832 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN1O95832 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CLDN1O95832 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN1O95832 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN1O95832 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN1O95832 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN1O95832 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
CLDN1O95832 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN1O95832 AK4P3-201ENST00000418260 669 ntBASIC17.66■□□□□ 0.42
CLDN1O95832 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CLDN1O95832 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.66■□□□□ 0.42
CLDN1O95832 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLDN1O95832 AC004264.1-201ENST00000608354 794 ntBASIC17.66■□□□□ 0.42
CLDN1O95832 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.66■□□□□ 0.42
CLDN1O95832 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN1O95832 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN1O95832 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN1O95832 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLDN1O95832 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN1O95832 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN1O95832 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CLDN1O95832 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN1O95832 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN1O95832 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms