Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
SNRNP200O75643 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
SNRNP200O75643 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNRNP200O75643 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19■□□□□ 0.63
SNRNP200O75643 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SNRNP200O75643 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19■□□□□ 0.63
SNRNP200O75643 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNRNP200O75643 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNRNP200O75643 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19■□□□□ 0.63
SNRNP200O75643 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNRNP200O75643 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19■□□□□ 0.63
SNRNP200O75643 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19■□□□□ 0.63
SNRNP200O75643 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNRNP200O75643 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNRNP200O75643 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNRNP200O75643 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNRNP200O75643 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNRNP200O75643 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNRNP200O75643 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNRNP200O75643 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.99■□□□□ 0.63
SNRNP200O75643 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SNRNP200O75643 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SNRNP200O75643 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SNRNP200O75643 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNRNP200O75643 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
SNRNP200O75643 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
SNRNP200O75643 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SNRNP200O75643 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.99■□□□□ 0.63
SNRNP200O75643 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.99■□□□□ 0.63
SNRNP200O75643 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SNRNP200O75643 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.99■□□□□ 0.63
SNRNP200O75643 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNRNP200O75643 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNRNP200O75643 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNRNP200O75643 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.98■□□□□ 0.63
SNRNP200O75643 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.98■□□□□ 0.63
SNRNP200O75643 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNRNP200O75643 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.98■□□□□ 0.63
SNRNP200O75643 AL355075.4-201ENST00000554988 638 ntBASIC18.98■□□□□ 0.63
SNRNP200O75643 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SNRNP200O75643 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNRNP200O75643 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNRNP200O75643 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.98■□□□□ 0.63
SNRNP200O75643 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SNRNP200O75643 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNRNP200O75643 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNRNP200O75643 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.98■□□□□ 0.63
SNRNP200O75643 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.98■□□□□ 0.63
SNRNP200O75643 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNRNP200O75643 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.98■□□□□ 0.63
SNRNP200O75643 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SNRNP200O75643 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNRNP200O75643 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNRNP200O75643 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNRNP200O75643 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNRNP200O75643 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.98■□□□□ 0.63
SNRNP200O75643 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.98■□□□□ 0.63
SNRNP200O75643 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.98■□□□□ 0.63
SNRNP200O75643 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.98■□□□□ 0.63
SNRNP200O75643 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SNRNP200O75643 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNRNP200O75643 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.98■□□□□ 0.63
SNRNP200O75643 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SNRNP200O75643 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.98■□□□□ 0.63
SNRNP200O75643 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.98■□□□□ 0.63
SNRNP200O75643 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
SNRNP200O75643 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SNRNP200O75643 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 UBE2SP1-201ENST00000450587 669 ntBASIC18.97■□□□□ 0.63
SNRNP200O75643 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.97■□□□□ 0.63
SNRNP200O75643 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.97■□□□□ 0.63
SNRNP200O75643 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.97■□□□□ 0.63
SNRNP200O75643 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.97■□□□□ 0.63
SNRNP200O75643 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 TFP1-202ENST00000475455 1573 ntBASIC18.97■□□□□ 0.63
SNRNP200O75643 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SNRNP200O75643 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.97■□□□□ 0.63
SNRNP200O75643 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.97■□□□□ 0.63
SNRNP200O75643 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SNRNP200O75643 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SNRNP200O75643 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.96■□□□□ 0.63
SNRNP200O75643 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms