Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
PRPF40AO75400 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22.98■■□□□ 1.27
PRPF40AO75400 AC009237.14-201ENST00000609975 1594 ntBASIC22.98■■□□□ 1.27
PRPF40AO75400 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
PRPF40AO75400 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
PRPF40AO75400 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PRPF40AO75400 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PRPF40AO75400 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.98■■□□□ 1.27
PRPF40AO75400 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
PRPF40AO75400 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
PRPF40AO75400 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PRPF40AO75400 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PRPF40AO75400 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
PRPF40AO75400 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PRPF40AO75400 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PRPF40AO75400 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
PRPF40AO75400 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC22.97■■□□□ 1.27
PRPF40AO75400 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PRPF40AO75400 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
PRPF40AO75400 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PRPF40AO75400 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PRPF40AO75400 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PRPF40AO75400 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PRPF40AO75400 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
PRPF40AO75400 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC22.97■■□□□ 1.27
PRPF40AO75400 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
PRPF40AO75400 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.97■■□□□ 1.27
PRPF40AO75400 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.97■■□□□ 1.27
PRPF40AO75400 NTF6G-201ENST00000591094 616 ntBASIC22.97■■□□□ 1.27
PRPF40AO75400 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.97■■□□□ 1.27
PRPF40AO75400 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.97■■□□□ 1.27
PRPF40AO75400 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PRPF40AO75400 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PRPF40AO75400 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PRPF40AO75400 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
PRPF40AO75400 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
PRPF40AO75400 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PRPF40AO75400 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PRPF40AO75400 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
PRPF40AO75400 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PRPF40AO75400 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.97■■□□□ 1.27
PRPF40AO75400 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PRPF40AO75400 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PRPF40AO75400 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PRPF40AO75400 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
PRPF40AO75400 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.96■■□□□ 1.27
PRPF40AO75400 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.96■■□□□ 1.27
PRPF40AO75400 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
PRPF40AO75400 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC22.96■■□□□ 1.27
PRPF40AO75400 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PRPF40AO75400 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PRPF40AO75400 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC22.96■■□□□ 1.27
PRPF40AO75400 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PRPF40AO75400 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
PRPF40AO75400 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.96■■□□□ 1.27
PRPF40AO75400 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PRPF40AO75400 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PRPF40AO75400 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.96■■□□□ 1.27
PRPF40AO75400 AC022517.1-201ENST00000592429 346 ntBASIC22.96■■□□□ 1.27
PRPF40AO75400 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.96■■□□□ 1.27
PRPF40AO75400 AC243732.1-201ENST00000612648 864 ntBASIC22.96■■□□□ 1.27
PRPF40AO75400 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
PRPF40AO75400 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PRPF40AO75400 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PRPF40AO75400 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PRPF40AO75400 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
PRPF40AO75400 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PRPF40AO75400 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PRPF40AO75400 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
PRPF40AO75400 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.96■■□□□ 1.27
PRPF40AO75400 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.27
PRPF40AO75400 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PRPF40AO75400 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
PRPF40AO75400 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PRPF40AO75400 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
PRPF40AO75400 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
PRPF40AO75400 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
PRPF40AO75400 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.95■■□□□ 1.26
PRPF40AO75400 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.95■■□□□ 1.26
PRPF40AO75400 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
PRPF40AO75400 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
PRPF40AO75400 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.95■■□□□ 1.26
PRPF40AO75400 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.95■■□□□ 1.26
PRPF40AO75400 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.95■■□□□ 1.26
PRPF40AO75400 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
PRPF40AO75400 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.95■■□□□ 1.26
PRPF40AO75400 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.95■■□□□ 1.26
PRPF40AO75400 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC22.95■■□□□ 1.26
PRPF40AO75400 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PRPF40AO75400 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
PRPF40AO75400 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PRPF40AO75400 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PRPF40AO75400 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.94■■□□□ 1.26
PRPF40AO75400 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.94■■□□□ 1.26
PRPF40AO75400 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.94■■□□□ 1.26
PRPF40AO75400 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.94■■□□□ 1.26
PRPF40AO75400 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
PRPF40AO75400 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PRPF40AO75400 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.94■■□□□ 1.26
PRPF40AO75400 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms