Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CPNE3O75131 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE3O75131 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.99■□□□□ 0.63
CPNE3O75131 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.99■□□□□ 0.63
CPNE3O75131 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CPNE3O75131 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.99■□□□□ 0.63
CPNE3O75131 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.99■□□□□ 0.63
CPNE3O75131 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE3O75131 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CPNE3O75131 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE3O75131 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CPNE3O75131 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.99■□□□□ 0.63
CPNE3O75131 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CPNE3O75131 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE3O75131 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE3O75131 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE3O75131 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE3O75131 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.98■□□□□ 0.63
CPNE3O75131 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE3O75131 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE3O75131 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.98■□□□□ 0.63
CPNE3O75131 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.98■□□□□ 0.63
CPNE3O75131 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.98■□□□□ 0.63
CPNE3O75131 RARRES2P10-201ENST00000564312 460 ntBASIC18.98■□□□□ 0.63
CPNE3O75131 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.98■□□□□ 0.63
CPNE3O75131 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE3O75131 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE3O75131 PLK5-205ENST00000642079 1969 ntBASIC18.98■□□□□ 0.63
CPNE3O75131 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE3O75131 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.98■□□□□ 0.63
CPNE3O75131 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE3O75131 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
CPNE3O75131 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE3O75131 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE3O75131 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.97■□□□□ 0.63
CPNE3O75131 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE3O75131 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE3O75131 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE3O75131 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CPNE3O75131 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE3O75131 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE3O75131 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE3O75131 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE3O75131 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.97■□□□□ 0.63
CPNE3O75131 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE3O75131 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.97■□□□□ 0.63
CPNE3O75131 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE3O75131 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE3O75131 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.97■□□□□ 0.63
CPNE3O75131 AC124283.5-201ENST00000624661 1809 ntBASIC18.97■□□□□ 0.63
CPNE3O75131 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE3O75131 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.97■□□□□ 0.63
CPNE3O75131 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE3O75131 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE3O75131 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CPNE3O75131 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE3O75131 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE3O75131 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE3O75131 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.96■□□□□ 0.63
CPNE3O75131 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.96■□□□□ 0.63
CPNE3O75131 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.96■□□□□ 0.63
CPNE3O75131 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.96■□□□□ 0.63
CPNE3O75131 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.96■□□□□ 0.63
CPNE3O75131 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.96■□□□□ 0.63
CPNE3O75131 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.96■□□□□ 0.63
CPNE3O75131 AL031963.3-201ENST00000606441 850 ntBASIC18.96■□□□□ 0.63
CPNE3O75131 AL049637.2-201ENST00000641778 930 ntBASIC18.96■□□□□ 0.63
CPNE3O75131 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CPNE3O75131 KRT8P20-201ENST00000423953 1409 ntBASIC18.96■□□□□ 0.63
CPNE3O75131 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE3O75131 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE3O75131 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE3O75131 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE3O75131 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CPNE3O75131 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE3O75131 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE3O75131 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CPNE3O75131 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE3O75131 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.95■□□□□ 0.62
CPNE3O75131 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE3O75131 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.95■□□□□ 0.62
CPNE3O75131 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE3O75131 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CPNE3O75131 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CPNE3O75131 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE3O75131 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CPNE3O75131 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.95■□□□□ 0.62
CPNE3O75131 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE3O75131 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE3O75131 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE3O75131 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.95■□□□□ 0.62
CPNE3O75131 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.95■□□□□ 0.62
CPNE3O75131 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE3O75131 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE3O75131 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CPNE3O75131 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE3O75131 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.95■□□□□ 0.62
CPNE3O75131 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE3O75131 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE3O75131 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms