Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.77■□□□□ 0.44
PFDN1O60925 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.77■□□□□ 0.44
PFDN1O60925 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.77■□□□□ 0.44
PFDN1O60925 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PFDN1O60925 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PFDN1O60925 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PFDN1O60925 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.77■□□□□ 0.44
PFDN1O60925 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PFDN1O60925 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PFDN1O60925 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PFDN1O60925 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PFDN1O60925 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PFDN1O60925 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
PFDN1O60925 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PFDN1O60925 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PFDN1O60925 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
PFDN1O60925 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PFDN1O60925 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PFDN1O60925 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PFDN1O60925 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PFDN1O60925 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
PFDN1O60925 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.77■□□□□ 0.43
PFDN1O60925 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.77■□□□□ 0.43
PFDN1O60925 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PFDN1O60925 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PFDN1O60925 AC068418.2-201ENST00000577309 3703 ntBASIC17.76■□□□□ 0.43
PFDN1O60925 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN1O60925 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN1O60925 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN1O60925 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PFDN1O60925 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN1O60925 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN1O60925 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN1O60925 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN1O60925 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.76■□□□□ 0.43
PFDN1O60925 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.76■□□□□ 0.43
PFDN1O60925 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PFDN1O60925 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.76■□□□□ 0.43
PFDN1O60925 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN1O60925 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.76■□□□□ 0.43
PFDN1O60925 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN1O60925 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PFDN1O60925 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN1O60925 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PFDN1O60925 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN1O60925 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PFDN1O60925 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN1O60925 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.76■□□□□ 0.43
PFDN1O60925 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN1O60925 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PFDN1O60925 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PFDN1O60925 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN1O60925 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PFDN1O60925 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN1O60925 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PFDN1O60925 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN1O60925 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.75■□□□□ 0.43
PFDN1O60925 BICD1-207ENST00000551848 1962 ntBASIC17.75■□□□□ 0.43
PFDN1O60925 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.75■□□□□ 0.43
PFDN1O60925 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.75■□□□□ 0.43
PFDN1O60925 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN1O60925 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN1O60925 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN1O60925 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN1O60925 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN1O60925 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN1O60925 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN1O60925 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN1O60925 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN1O60925 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN1O60925 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN1O60925 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN1O60925 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN1O60925 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN1O60925 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
PFDN1O60925 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN1O60925 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PFDN1O60925 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
PFDN1O60925 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PFDN1O60925 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.74■□□□□ 0.43
PFDN1O60925 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PFDN1O60925 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PFDN1O60925 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
PFDN1O60925 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PFDN1O60925 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PFDN1O60925 AC018695.7-201ENST00000624587 2492 ntBASIC17.74■□□□□ 0.43
PFDN1O60925 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PFDN1O60925 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PFDN1O60925 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PFDN1O60925 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PFDN1O60925 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.74■□□□□ 0.43
PFDN1O60925 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PFDN1O60925 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PFDN1O60925 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PFDN1O60925 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PFDN1O60925 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PFDN1O60925 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PFDN1O60925 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PFDN1O60925 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PFDN1O60925 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms