Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.07■□□□□ 0.32
PHF1O43189 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PHF1O43189 CYP2T3P-201ENST00000601990 817 ntBASIC17.07■□□□□ 0.32
PHF1O43189 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
PHF1O43189 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PHF1O43189 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHF1O43189 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PHF1O43189 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.07■□□□□ 0.32
PHF1O43189 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.07■□□□□ 0.32
PHF1O43189 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.07■□□□□ 0.32
PHF1O43189 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PHF1O43189 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PHF1O43189 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.06■□□□□ 0.32
PHF1O43189 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PHF1O43189 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PHF1O43189 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 MCRIP2P1-201ENST00000394346 511 ntBASIC17.06■□□□□ 0.32
PHF1O43189 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.06■□□□□ 0.32
PHF1O43189 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PHF1O43189 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
PHF1O43189 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.06■□□□□ 0.32
PHF1O43189 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PHF1O43189 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PHF1O43189 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PHF1O43189 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHF1O43189 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHF1O43189 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHF1O43189 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.05■□□□□ 0.32
PHF1O43189 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHF1O43189 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHF1O43189 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.05■□□□□ 0.32
PHF1O43189 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHF1O43189 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PHF1O43189 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHF1O43189 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PHF1O43189 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.05■□□□□ 0.32
PHF1O43189 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.05■□□□□ 0.32
PHF1O43189 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PHF1O43189 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
PHF1O43189 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.05■□□□□ 0.32
PHF1O43189 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.05■□□□□ 0.32
PHF1O43189 AC100791.3-201ENST00000617619 330 ntBASIC17.05■□□□□ 0.32
PHF1O43189 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHF1O43189 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.05■□□□□ 0.32
PHF1O43189 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHF1O43189 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.05■□□□□ 0.32
PHF1O43189 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHF1O43189 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.05■□□□□ 0.32
PHF1O43189 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHF1O43189 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PHF1O43189 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHF1O43189 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.04■□□□□ 0.32
PHF1O43189 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHF1O43189 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHF1O43189 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.04■□□□□ 0.32
PHF1O43189 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHF1O43189 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PHF1O43189 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.04■□□□□ 0.32
PHF1O43189 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHF1O43189 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PHF1O43189 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHF1O43189 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
PHF1O43189 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.04■□□□□ 0.32
PHF1O43189 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
PHF1O43189 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.04■□□□□ 0.32
PHF1O43189 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.04■□□□□ 0.32
PHF1O43189 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PHF1O43189 SNORA78-201ENST00000459373 127 ntBASIC17.04■□□□□ 0.32
PHF1O43189 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.04■□□□□ 0.32
PHF1O43189 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.04■□□□□ 0.32
PHF1O43189 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.04■□□□□ 0.32
PHF1O43189 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.04■□□□□ 0.32
PHF1O43189 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.04■□□□□ 0.32
PHF1O43189 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.04■□□□□ 0.32
PHF1O43189 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.04■□□□□ 0.32
PHF1O43189 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
PHF1O43189 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PHF1O43189 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PHF1O43189 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.04■□□□□ 0.32
PHF1O43189 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PHF1O43189 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PHF1O43189 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms