Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC13.53□□□□□ -0.24
NDUFA1O15239 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NDUFA1O15239 AC027612.3-201ENST00000413684 1047 ntBASIC13.53□□□□□ -0.24
NDUFA1O15239 DUX4L2-201ENST00000561772 1275 ntBASIC13.53□□□□□ -0.24
NDUFA1O15239 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
NDUFA1O15239 DUX4L6-201ENST00000626483 1275 ntBASIC13.53□□□□□ -0.24
NDUFA1O15239 DUX4L1-201ENST00000627662 1275 ntBASIC13.53□□□□□ -0.24
NDUFA1O15239 DUX4L8-201ENST00000629013 1275 ntBASIC13.53□□□□□ -0.24
NDUFA1O15239 DUX4L3-201ENST00000630187 1275 ntBASIC13.53□□□□□ -0.24
NDUFA1O15239 DUX4L7-201ENST00000630678 1275 ntBASIC13.53□□□□□ -0.24
NDUFA1O15239 DUX4L5-201ENST00000630834 1275 ntBASIC13.53□□□□□ -0.24
NDUFA1O15239 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.53□□□□□ -0.24
NDUFA1O15239 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 AC005082.1-201ENST00000413042 2259 ntBASIC13.53□□□□□ -0.24
NDUFA1O15239 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 LINC02228-203ENST00000641970 1355 ntBASIC13.53□□□□□ -0.24
NDUFA1O15239 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
NDUFA1O15239 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.53□□□□□ -0.24
NDUFA1O15239 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.53□□□□□ -0.24
NDUFA1O15239 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
NDUFA1O15239 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.53□□□□□ -0.24
NDUFA1O15239 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
NDUFA1O15239 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NDUFA1O15239 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.53□□□□□ -0.24
NDUFA1O15239 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.52□□□□□ -0.24
NDUFA1O15239 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NDUFA1O15239 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NDUFA1O15239 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
NDUFA1O15239 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NDUFA1O15239 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.52□□□□□ -0.24
NDUFA1O15239 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA1O15239 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA1O15239 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13.52□□□□□ -0.25
NDUFA1O15239 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA1O15239 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.52□□□□□ -0.25
NDUFA1O15239 AC010141.2-201ENST00000452426 721 ntBASIC13.52□□□□□ -0.25
NDUFA1O15239 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA1O15239 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.52□□□□□ -0.25
NDUFA1O15239 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NDUFA1O15239 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NDUFA1O15239 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA1O15239 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA1O15239 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.52□□□□□ -0.25
NDUFA1O15239 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA1O15239 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.52□□□□□ -0.25
NDUFA1O15239 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.52□□□□□ -0.25
NDUFA1O15239 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC13.52□□□□□ -0.25
NDUFA1O15239 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA1O15239 LINC01465-201ENST00000408887 1940 ntBASIC13.52□□□□□ -0.25
NDUFA1O15239 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC13.52□□□□□ -0.25
NDUFA1O15239 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA1O15239 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA1O15239 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA1O15239 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA1O15239 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA1O15239 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.52□□□□□ -0.25
NDUFA1O15239 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NDUFA1O15239 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA1O15239 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA1O15239 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NDUFA1O15239 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.51□□□□□ -0.25
NDUFA1O15239 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA1O15239 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA1O15239 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA1O15239 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA1O15239 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
NDUFA1O15239 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
NDUFA1O15239 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA1O15239 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA1O15239 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA1O15239 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.51□□□□□ -0.25
NDUFA1O15239 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA1O15239 DPP3P2-201ENST00000416030 1696 ntBASIC13.51□□□□□ -0.25
NDUFA1O15239 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA1O15239 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA1O15239 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.51□□□□□ -0.25
NDUFA1O15239 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA1O15239 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA1O15239 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA1O15239 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA1O15239 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NDUFA1O15239 AC105265.2-201ENST00000467189 838 ntBASIC13.51□□□□□ -0.25
NDUFA1O15239 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.51□□□□□ -0.25
NDUFA1O15239 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.51□□□□□ -0.25
NDUFA1O15239 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.51□□□□□ -0.25
NDUFA1O15239 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NDUFA1O15239 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NDUFA1O15239 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NDUFA1O15239 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NDUFA1O15239 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms