Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLIC1O00299 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIC1O00299 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIC1O00299 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIC1O00299 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLIC1O00299 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLIC1O00299 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CLIC1O00299 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CLIC1O00299 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.65■□□□□ 0.58
CLIC1O00299 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC1O00299 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC1O00299 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CLIC1O00299 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC1O00299 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC1O00299 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC1O00299 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.65■□□□□ 0.58
CLIC1O00299 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC1O00299 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC1O00299 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CLIC1O00299 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLIC1O00299 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CLIC1O00299 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC1O00299 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC1O00299 HLA-G-202ENST00000376815 851 ntBASIC18.65■□□□□ 0.58
CLIC1O00299 HLA-G-203ENST00000376818 1127 ntBASIC18.65■□□□□ 0.58
CLIC1O00299 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.65■□□□□ 0.58
CLIC1O00299 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLIC1O00299 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.65■□□□□ 0.58
CLIC1O00299 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.65■□□□□ 0.58
CLIC1O00299 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.65■□□□□ 0.58
CLIC1O00299 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.65■□□□□ 0.58
CLIC1O00299 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.65■□□□□ 0.58
CLIC1O00299 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.65■□□□□ 0.58
CLIC1O00299 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.65■□□□□ 0.58
CLIC1O00299 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CLIC1O00299 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC1O00299 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.65■□□□□ 0.58
CLIC1O00299 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC1O00299 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC1O00299 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
CLIC1O00299 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC1O00299 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLIC1O00299 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.65■□□□□ 0.58
CLIC1O00299 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLIC1O00299 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.64■□□□□ 0.58
CLIC1O00299 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.64■□□□□ 0.58
CLIC1O00299 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLIC1O00299 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CLIC1O00299 TNXA-203ENST00000507684 2038 ntBASIC18.64■□□□□ 0.58
CLIC1O00299 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC1O00299 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.64■□□□□ 0.57
CLIC1O00299 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC1O00299 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC1O00299 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC1O00299 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC1O00299 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC1O00299 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.64■□□□□ 0.57
CLIC1O00299 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.64■□□□□ 0.57
CLIC1O00299 CYP2T3P-201ENST00000601990 817 ntBASIC18.64■□□□□ 0.57
CLIC1O00299 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.64■□□□□ 0.57
CLIC1O00299 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC1O00299 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC1O00299 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC1O00299 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC1O00299 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
CLIC1O00299 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC1O00299 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CLIC1O00299 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC1O00299 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC1O00299 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLIC1O00299 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.64■□□□□ 0.57
CLIC1O00299 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC1O00299 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC1O00299 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC1O00299 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC1O00299 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLIC1O00299 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC1O00299 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.63■□□□□ 0.57
CLIC1O00299 KRT18P5-201ENST00000436075 1291 ntBASIC18.63■□□□□ 0.57
CLIC1O00299 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC1O00299 AC069236.1-201ENST00000604339 616 ntBASIC18.63■□□□□ 0.57
CLIC1O00299 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC1O00299 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.63■□□□□ 0.57
CLIC1O00299 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC1O00299 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC1O00299 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC1O00299 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC1O00299 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLIC1O00299 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC1O00299 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.63■□□□□ 0.57
CLIC1O00299 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLIC1O00299 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLIC1O00299 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC1O00299 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC1O00299 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC1O00299 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.63■□□□□ 0.57
CLIC1O00299 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLIC1O00299 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC1O00299 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC1O00299 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms