Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMX3A6NHT5 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMX3A6NHT5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMX3A6NHT5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HMX3A6NHT5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMX3A6NHT5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HMX3A6NHT5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMX3A6NHT5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HMX3A6NHT5 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HMX3A6NHT5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
HMX3A6NHT5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMX3A6NHT5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMX3A6NHT5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.14■□□□□ 0.33
HMX3A6NHT5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMX3A6NHT5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.14■□□□□ 0.33
HMX3A6NHT5 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMX3A6NHT5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.14■□□□□ 0.33
HMX3A6NHT5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.14■□□□□ 0.33
HMX3A6NHT5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HMX3A6NHT5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMX3A6NHT5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMX3A6NHT5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMX3A6NHT5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMX3A6NHT5 SLC47A1P1-202ENST00000449666 945 ntBASIC17.14■□□□□ 0.33
HMX3A6NHT5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.14■□□□□ 0.33
HMX3A6NHT5 AC087239.1-201ENST00000622671 572 ntBASIC17.14■□□□□ 0.33
HMX3A6NHT5 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.14■□□□□ 0.33
HMX3A6NHT5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HMX3A6NHT5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.14■□□□□ 0.33
HMX3A6NHT5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMX3A6NHT5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMX3A6NHT5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMX3A6NHT5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMX3A6NHT5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMX3A6NHT5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.14■□□□□ 0.33
HMX3A6NHT5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
HMX3A6NHT5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMX3A6NHT5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.13■□□□□ 0.33
HMX3A6NHT5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMX3A6NHT5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMX3A6NHT5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMX3A6NHT5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMX3A6NHT5 AC010141.3-201ENST00000456659 717 ntBASIC17.13■□□□□ 0.33
HMX3A6NHT5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.13■□□□□ 0.33
HMX3A6NHT5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.13■□□□□ 0.33
HMX3A6NHT5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMX3A6NHT5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMX3A6NHT5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HMX3A6NHT5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HMX3A6NHT5 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
HMX3A6NHT5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HMX3A6NHT5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HMX3A6NHT5 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMX3A6NHT5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMX3A6NHT5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMX3A6NHT5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMX3A6NHT5 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMX3A6NHT5 AC011484.1-201ENST00000377652 1995 ntBASIC17.12■□□□□ 0.33
HMX3A6NHT5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMX3A6NHT5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMX3A6NHT5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMX3A6NHT5 UNC93B3-201ENST00000308076 687 ntBASIC17.12■□□□□ 0.33
HMX3A6NHT5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.12■□□□□ 0.33
HMX3A6NHT5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HMX3A6NHT5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMX3A6NHT5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HMX3A6NHT5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMX3A6NHT5 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMX3A6NHT5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMX3A6NHT5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMX3A6NHT5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMX3A6NHT5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.12■□□□□ 0.33
HMX3A6NHT5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HMX3A6NHT5 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HMX3A6NHT5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMX3A6NHT5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HMX3A6NHT5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMX3A6NHT5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMX3A6NHT5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMX3A6NHT5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.11■□□□□ 0.33
HMX3A6NHT5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMX3A6NHT5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.11■□□□□ 0.33
HMX3A6NHT5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMX3A6NHT5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
HMX3A6NHT5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMX3A6NHT5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMX3A6NHT5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.11■□□□□ 0.33
HMX3A6NHT5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.11■□□□□ 0.33
HMX3A6NHT5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMX3A6NHT5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.11■□□□□ 0.33
HMX3A6NHT5 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.11■□□□□ 0.33
HMX3A6NHT5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.11■□□□□ 0.33
HMX3A6NHT5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
HMX3A6NHT5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.11■□□□□ 0.33
HMX3A6NHT5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HMX3A6NHT5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.11■□□□□ 0.33
HMX3A6NHT5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMX3A6NHT5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HMX3A6NHT5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMX3A6NHT5 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms