Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC01546A6NGU7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
LINC01546A6NGU7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LINC01546A6NGU7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14□□□□□ -0.17
LINC01546A6NGU7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14□□□□□ -0.17
LINC01546A6NGU7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14□□□□□ -0.17
LINC01546A6NGU7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14□□□□□ -0.17
LINC01546A6NGU7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14□□□□□ -0.17
LINC01546A6NGU7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14□□□□□ -0.17
LINC01546A6NGU7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC01546A6NGU7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LINC01546A6NGU7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 AC018470.1-201ENST00000624790 3129 ntBASIC13.99□□□□□ -0.17
LINC01546A6NGU7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC13.99□□□□□ -0.17
LINC01546A6NGU7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 AC105233.4-201ENST00000642045 216 ntBASIC13.99□□□□□ -0.17
LINC01546A6NGU7 PTBP1P-201ENST00000554374 1601 ntBASIC13.99□□□□□ -0.17
LINC01546A6NGU7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC01546A6NGU7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 AC007322.3-201ENST00000426526 701 ntBASIC13.98□□□□□ -0.17
LINC01546A6NGU7 KRT16P3-201ENST00000439127 1283 ntBASIC13.98□□□□□ -0.17
LINC01546A6NGU7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 AC120498.10-201ENST00000621827 505 ntBASIC13.98□□□□□ -0.17
LINC01546A6NGU7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 KRT16P6-202ENST00000425692 1426 ntBASIC13.98□□□□□ -0.17
LINC01546A6NGU7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01546A6NGU7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms