Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC162PA2VCL2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC162PA2VCL2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC162PA2VCL2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC162PA2VCL2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC162PA2VCL2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC162PA2VCL2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC162PA2VCL2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC162PA2VCL2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 PHGDH-210ENST00000641115 1638 ntBASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 ID1-201ENST00000376105 1233 ntBASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 AC006557.6-201ENST00000623071 864 ntBASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC162PA2VCL2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 AC092368.3-202ENST00000574180 1591 ntBASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 HLA-B-256ENST00000639848 1089 ntBASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC162PA2VCL2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 AC060766.5-201ENST00000590539 871 ntBASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 AP001271.2-201ENST00000624018 1556 ntBASIC19.78■□□□□ 0.76
CCDC162PA2VCL2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 AL158211.5-201ENST00000623583 2518 ntBASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 PNMA6B-201ENST00000538162 1200 ntBASIC19.77■□□□□ 0.76
CCDC162PA2VCL2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms