Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC120498.9-201ENST00000339021 3867 ntBASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.55■□□□□ 0.56
TCRBV3S1A0A5B6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 AC105265.2-201ENST00000467189 838 ntBASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 DUX4L2-201ENST00000561772 1275 ntBASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 DUX4L6-201ENST00000626483 1275 ntBASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 DUX4L1-201ENST00000627662 1275 ntBASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 DUX4L8-201ENST00000629013 1275 ntBASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 DUX4L3-201ENST00000630187 1275 ntBASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 DUX4L7-201ENST00000630678 1275 ntBASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 DUX4L5-201ENST00000630834 1275 ntBASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TCRBV3S1A0A5B6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 PGM5P4-201ENST00000421970 445 ntBASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 KRT8P17-201ENST00000453110 1448 ntBASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 AC087633.2-202ENST00000565166 1439 ntBASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TCRBV3S1A0A5B6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 CCDC92B-201ENST00000575506 885 ntBASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 AL354811.1-201ENST00000610286 706 ntBASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TCRBV3S1A0A5B6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
TCRBV3S1A0A5B6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TCRBV3S1A0A5B6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.52■□□□□ 0.55
TCRBV3S1A0A5B6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 KRT16P6-202ENST00000425692 1426 ntBASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TCRBV3S1A0A5B6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms