Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 AC009947.2-201ENST00000444014 672 ntBASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 KRT126P-201ENST00000549467 1181 ntBASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 KRT16P6-202ENST00000425692 1426 ntBASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC163A0A0D9SF12 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC163A0A0D9SF12 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC163A0A0D9SF12 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC163A0A0D9SF12 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CCDC163A0A0D9SF12 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC163A0A0D9SF12 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCDC163A0A0D9SF12 KRT18P56-201ENST00000507275 550 ntBASIC19.66■□□□□ 0.74
CCDC163A0A0D9SF12 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC163A0A0D9SF12 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC163A0A0D9SF12 AL121956.5-201ENST00000625261 221 ntBASIC19.66■□□□□ 0.74
CCDC163A0A0D9SF12 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC163A0A0D9SF12 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC163A0A0D9SF12 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC163A0A0D9SF12 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC163A0A0D9SF12 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC163A0A0D9SF12 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC163A0A0D9SF12 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC163A0A0D9SF12 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC163A0A0D9SF12 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 MFAP1P1-201ENST00000442257 1255 ntBASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 AC092647.4-201ENST00000457211 535 ntBASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC163A0A0D9SF12 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC163A0A0D9SF12 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC163A0A0D9SF12 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC163A0A0D9SF12 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC163A0A0D9SF12 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC163A0A0D9SF12 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC163A0A0D9SF12 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC163A0A0D9SF12 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC163A0A0D9SF12 AC007663.1-201ENST00000438948 1240 ntBASIC19.64■□□□□ 0.73
CCDC163A0A0D9SF12 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC163A0A0D9SF12 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC163A0A0D9SF12 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC163A0A0D9SF12 AC018553.1-201ENST00000616682 1458 ntBASIC19.64■□□□□ 0.73
CCDC163A0A0D9SF12 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC163A0A0D9SF12 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC163A0A0D9SF12 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC163A0A0D9SF12 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC163A0A0D9SF12 AC233723.2-201ENST00000623798 2106 ntBASIC19.64■□□□□ 0.73
CCDC163A0A0D9SF12 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC163A0A0D9SF12 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC163A0A0D9SF12 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
CCDC163A0A0D9SF12 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC163A0A0D9SF12 Z98882.1-201ENST00000622160 2253 ntBASIC19.63■□□□□ 0.73
CCDC163A0A0D9SF12 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC163A0A0D9SF12 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC163A0A0D9SF12 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC163A0A0D9SF12 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC163A0A0D9SF12 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC163A0A0D9SF12 AC092338.2-201ENST00000568827 1415 ntBASIC19.63■□□□□ 0.73
CCDC163A0A0D9SF12 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC163A0A0D9SF12 TSPY17P-201ENST00000450329 467 ntBASIC19.63■□□□□ 0.73
CCDC163A0A0D9SF12 HOMER2P1-201ENST00000455653 964 ntBASIC19.63■□□□□ 0.73
CCDC163A0A0D9SF12 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC163A0A0D9SF12 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC163A0A0D9SF12 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC163A0A0D9SF12 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC163A0A0D9SF12 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms