Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.31□□□□□ -0.12
IGHV4-28A0A0C4DH34 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 AC133681.1-201ENST00000465482 601 ntBASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 AC008550.1-201ENST00000511500 884 ntBASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 AC110285.5-201ENST00000611501 352 ntBASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 AC073314.1-201ENST00000568729 2216 ntBASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
IGHV4-28A0A0C4DH34 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 RPS2P4-201ENST00000476944 856 ntBASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
IGHV4-28A0A0C4DH34 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms