Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 GRAP2-201ENST00000344138 3893 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AGPAT4-201ENST00000320285 7865 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 NR2E1-201ENST00000368983 2612 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 USP17L10-201ENST00000417945 1593 ntAPPRIS P2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 HEXA-209ENST00000567159 1582 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 DOPEY2-202ENST00000399151 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SPRTN-204ENST00000391858 3559 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 C1S-203ENST00000402681 2522 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 ADAR-201ENST00000368471 6515 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AC005481.1-201ENST00000409610 3456 ntTSL 4 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 TACC2-202ENST00000334433 9377 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SLC39A9-201ENST00000031146 5192 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 NELL2-204ENST00000437801 3279 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 MCTP1-201ENST00000312216 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 CNDP2-202ENST00000324301 2349 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 CACNA1E-205ENST00000367570 9724 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 OPTC-201ENST00000367222 1359 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 TRIM51CP-201ENST00000505076 1357 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AC011487.2-202ENST00000599707 1356 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 PTPN20-207ENST00000395725 2226 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 MYO15A-217ENST00000615845 11860 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 PCDHGC5-201ENST00000252087 4761 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 NLRP1-216ENST00000617618 4788 ntAPPRIS P4 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 HRH2-201ENST00000231683 1080 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 CDKL3-201ENST00000265334 2130 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 CDK5-201ENST00000297518 783 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 CST2-201ENST00000304725 748 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 PLA2G1B-201ENST00000308366 565 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 OR52B3P-201ENST00000314715 928 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 MTRF1LP1-201ENST00000321235 679 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SULT1A2-201ENST00000335715 1090 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 RNU6-219P-201ENST00000364728 107 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 Y_RNA.286-201ENST00000364813 102 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 RNU6-54P-201ENST00000365563 107 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 RNU6-395P-201ENST00000365662 106 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SUPT3H-201ENST00000371458 728 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 C9orf116-203ENST00000371791 781 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 WFDC3-203ENST00000372630 597 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AL391987.4-201ENST00000377547 439 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 MBD3L2-201ENST00000381393 793 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 RNU6-1029P-201ENST00000384109 107 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SNORA20B-201ENST00000384220 132 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SNORD116-22-201ENST00000384430 92 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 Y_RNA.549-201ENST00000384657 102 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 MIR517A-201ENST00000385001 87 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 TRDV2-201ENST00000390469 520 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 U3.49-201ENST00000391065 214 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SNORA40.18-201ENST00000391200 128 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 RNU6-381P-201ENST00000391259 108 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SNORA75.5-201ENST00000391291 81 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 THYN1-204ENST00000392595 893 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 ATP5G2-202ENST00000394349 878 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AC005102.1-201ENST00000403118 479 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SOD1P1-201ENST00000407803 440 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 MIR1303-201ENST00000408625 86 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 TMEM139-202ENST00000409102 1226 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 RBM14-203ENST00000409372 876 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SNORA19.1-201ENST00000410656 129 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 RNU6-575P-201ENST00000411326 105 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 RIPPLY1-202ENST00000411805 786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AC006461.1-201ENST00000412637 326 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AL035422.1-201ENST00000414193 397 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 XKRYP4-201ENST00000414395 483 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 PYY3-201ENST00000419078 213 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 UQCRFS1P2-201ENST00000426701 722 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 RPL21P110-201ENST00000433345 446 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AC007881.2-201ENST00000434990 570 ntTSL 4 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AL122003.1-201ENST00000435206 784 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AC128677.1-201ENST00000436016 442 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 LINC01366-201ENST00000436248 983 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 LINC01039-201ENST00000437113 650 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 PHBP4-201ENST00000437447 837 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 HCG2040054-202ENST00000439182 362 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AL445933.2-201ENST00000440249 265 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 INO80C-203ENST00000441607 904 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 PPIAP33-201ENST00000441944 555 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AC078962.1-201ENST00000444853 281 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 Z93242.2-201ENST00000445666 394 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 GAS5-219ENST00000449289 542 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 XKRYP5-201ENST00000449659 483 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 RPS20P10-201ENST00000451209 253 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 GPAA1P1-201ENST00000453019 931 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 NEURL1-AS1-202ENST00000453753 640 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 FDPSP2-201ENST00000453932 897 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 202.7 ms