Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC091849.1-201ENST00000509920 121 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 IGHVIII-25-1-201ENST00000522143 241 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 AC021820.1-201ENST00000525564 808 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 REG4-204ENST00000530654 612 ntTSL 5 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 SSU72P6-201ENST00000532644 488 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 AP002383.5-201ENST00000542623 1161 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 AC073916.1-201ENST00000545095 130 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 MAGEB5-201ENST00000602297 1216 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 AL049840.5-201ENST00000602827 552 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 AC006363.1-201ENST00000603806 463 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 MRPL57P1-201ENST00000621486 265 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 AC138965.3-201ENST00000623875 498 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 AC114546.4-201ENST00000624413 369 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 AC073857.1-201ENST00000625082 1054 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AL359955.1-201ENST00000455242 3275 ntBASIC4.75□□□□□ -1.65
AP1S3Q96PC3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AC074141.1-201ENST00000588129 2995 ntBASIC4.75□□□□□ -1.65
AP1S3Q96PC3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 DPPA2P2-201ENST00000418220 897 ntBASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AL590399.2-201ENST00000427536 309 ntBASIC4.75□□□□□ -1.65
AP1S3Q96PC3 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 VDAC2P3-201ENST00000430995 828 ntBASIC4.75□□□□□ -1.65
AP1S3Q96PC3 RPL22P11-201ENST00000434894 385 ntBASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 SNX18P9-201ENST00000440580 835 ntBASIC4.75□□□□□ -1.65
AP1S3Q96PC3 SNRPBP1-201ENST00000443634 282 ntBASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 OR13K1P-201ENST00000444577 975 ntBASIC4.75□□□□□ -1.65
AP1S3Q96PC3 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AC133965.1-201ENST00000452984 354 ntBASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 OR7E7P-201ENST00000455678 1012 ntBASIC4.75□□□□□ -1.65
AP1S3Q96PC3 DEFB109A-201ENST00000482450 265 ntBASIC4.75□□□□□ -1.65
AP1S3Q96PC3 RN7SL849P-201ENST00000485236 295 ntBASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 FAM30C-201ENST00000561158 410 ntBASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 DIMT1P1-201ENST00000603970 763 ntBASIC4.75□□□□□ -1.65
AP1S3Q96PC3 AC013489.3-201ENST00000623274 517 ntBASIC4.75□□□□□ -1.65
AP1S3Q96PC3 RACK1-235ENST00000626067 564 ntTSL 2 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 FKBP1AP4-201ENST00000631775 336 ntBASIC4.75□□□□□ -1.65
AP1S3Q96PC3 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
AP1S3Q96PC3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms