Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC063943.3-201ENST00000615562 356 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 BSNDP3-201ENST00000617487 364 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AC073254.1-206ENST00000617813 907 ntTSL 5 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 ZNF410-225ENST00000639051 936 ntTSL 5 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AC135352.1-201ENST00000506173 1418 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AC020549.1-201ENST00000536916 1440 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 HCG18-244ENST00000602516 2890 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AL669831.5-218ENST00000591702 1873 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 HSP90AB2P-201ENST00000507090 2176 ntBASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 LRMP-205ENST00000548766 2193 ntAPPRIS P2 TSL 2 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
DEPDC4Q8N2C3 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AL590763.1-201ENST00000398297 1545 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 LINC01924-201ENST00000589376 1722 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 MT-RNR2-201ENST00000387347 1559 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 RNU5D-1-201ENST00000363299 116 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 RNU6-666P-201ENST00000363499 107 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 CST9LP1-201ENST00000376987 444 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 MIR217-201ENST00000384817 110 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 FTH1P10-201ENST00000401830 930 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 RNU2-41P-201ENST00000410991 178 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AC009319.1-201ENST00000411493 754 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 RPL17P12-201ENST00000413391 526 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 RPL7AP72-201ENST00000417266 768 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 CNOT4P1-201ENST00000417432 1199 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AKR1B1P8-201ENST00000418396 936 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 E2F4P1-201ENST00000422443 1133 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AC009480.2-201ENST00000422916 432 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 SNAI1P1-201ENST00000428587 777 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 EIF4A1P10-201ENST00000428832 1216 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AC245452.2-201ENST00000435222 392 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 RPL15P1-201ENST00000439981 600 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 MTND6P15-201ENST00000441157 521 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 ASS1P11-201ENST00000441309 1216 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AL512593.1-201ENST00000444758 779 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AC073254.1-202ENST00000447488 640 ntTSL 3 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 LINC01830-201ENST00000450551 636 ntTSL 5 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 RPSAP64-201ENST00000451820 336 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 SNX18P4-201ENST00000456554 838 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AL357874.2-201ENST00000457044 679 ntTSL 3 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AC092042.1-201ENST00000457115 509 ntTSL 3 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 PCBP1-AS1-242ENST00000458686 1020 ntTSL 5 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 RN7SL554P-201ENST00000468197 292 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AC104687.1-201ENST00000485829 412 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 PAX8-211ENST00000497038 816 ntTSL 5 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 PLA2G12AP1-201ENST00000497678 568 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AL358832.1-201ENST00000497800 389 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AC105252.1-201ENST00000503089 286 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 RACK1-211ENST00000504726 388 ntTSL 5 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 NPM1P21-201ENST00000513394 762 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 IGKV2D-18-201ENST00000519785 375 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AC015468.1-201ENST00000523852 874 ntTSL 3 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 GTF2IP11-201ENST00000526931 420 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AC022239.1-201ENST00000527922 435 ntTSL 5 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AC109635.3-201ENST00000529536 185 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AP004247.1-201ENST00000531556 1289 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 STXBP6-206ENST00000548369 682 ntTSL 2 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AC020892.2-201ENST00000557891 387 ntTSL 3 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AC137800.1-202ENST00000562098 446 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AL358335.3-201ENST00000604678 327 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 AP000860.1-201ENST00000605250 559 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 DUXAP9-208ENST00000622815 614 ntBASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 LINC01206-219ENST00000625703 820 ntTSL 5 BASIC7.73□□□□□ -1.17
DEPDC4Q8N2C3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms