Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
LINC00346Q8IVM7 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.83□□□□□ -1.48
LINC00346Q8IVM7 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.83□□□□□ -1.48
LINC00346Q8IVM7 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
LINC00346Q8IVM7 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
LINC00346Q8IVM7 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.83□□□□□ -1.48
LINC00346Q8IVM7 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LINC00346Q8IVM7 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
LINC00346Q8IVM7 AC107021.2-201ENST00000567714 2095 ntBASIC5.83□□□□□ -1.48
LINC00346Q8IVM7 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AC005332.9-201ENST00000620266 2921 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AL589826.1-201ENST00000340697 249 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 RNA5SP302-201ENST00000364896 100 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 LDHAP5-201ENST00000394996 622 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 RPLP1P10-201ENST00000413972 339 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AL161742.1-201ENST00000418154 584 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AC234781.4-201ENST00000419384 244 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AC009303.1-201ENST00000426307 352 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AL138479.1-201ENST00000426913 484 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 MTCO1P45-201ENST00000431457 267 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 RSL24D1P8-201ENST00000434442 492 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AC016908.1-201ENST00000442571 1219 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AC008868.1-201ENST00000509786 737 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AC096661.1-201ENST00000515870 822 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 RBMS2P1-201ENST00000525031 1226 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 ANP32BP1-202ENST00000568553 737 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 OR51C1P-201ENST00000608504 942 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AC005277.2-201ENST00000617898 390 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 MRPL57P1-201ENST00000621486 265 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AC027559.1-201ENST00000636288 271 ntBASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
LINC00346Q8IVM7 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.81□□□□□ -1.48
LINC00346Q8IVM7 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LINC00346Q8IVM7 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LINC00346Q8IVM7 AL022323.4-201ENST00000623980 13120 ntBASIC5.81□□□□□ -1.48
LINC00346Q8IVM7 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.81□□□□□ -1.48
LINC00346Q8IVM7 AC092701.1-201ENST00000623627 1551 ntBASIC5.81□□□□□ -1.48
LINC00346Q8IVM7 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LINC00346Q8IVM7 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LINC00346Q8IVM7 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.81□□□□□ -1.48
LINC00346Q8IVM7 PROS2P-201ENST00000474651 1951 ntBASIC5.81□□□□□ -1.48
LINC00346Q8IVM7 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
LINC00346Q8IVM7 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
LINC00346Q8IVM7 FAM32BP-201ENST00000344033 333 ntBASIC5.81□□□□□ -1.48
LINC00346Q8IVM7 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.81□□□□□ -1.48
LINC00346Q8IVM7 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
LINC00346Q8IVM7 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.81□□□□□ -1.48
LINC00346Q8IVM7 ST13P16-201ENST00000401760 781 ntBASIC5.81□□□□□ -1.48
LINC00346Q8IVM7 AL589655.1-201ENST00000405398 482 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms