Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ZSCAN26-203ENST00000611552 1030 ntTSL 2 BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 AL139418.1-201ENST00000613613 177 ntBASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 MAGEB3-202ENST00000620842 1129 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 MED15P6-202ENST00000621415 787 ntBASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 FMO10P-201ENST00000455032 1493 ntBASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 AC068733.2-201ENST00000605434 1418 ntBASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 AC020904.2-202ENST00000614660 1401 ntBASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 CPA2-201ENST00000222481 1366 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
FOXR1Q6PIV2 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 GPM6A-221ENST00000515090 1500 ntTSL 2 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 PCBP1-AS1-243ENST00000458698 1893 ntTSL 3 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 ARHGAP42P4-201ENST00000549782 2934 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AC008033.1-201ENST00000216407 1162 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 RNU4-51P-201ENST00000364206 140 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 Y_RNA.554-201ENST00000384672 102 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 Z86062.1-201ENST00000406773 777 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 GLS-205ENST00000409626 997 ntTSL 2 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 CTSLP8-201ENST00000413075 967 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 TCEA1P4-201ENST00000415066 844 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 SLC25A24P1-202ENST00000434803 1220 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AL354941.1-201ENST00000438600 464 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AL359711.1-201ENST00000441999 123 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 CCNJP1-201ENST00000450600 1149 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 Z95152.1-201ENST00000453556 656 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 SNX18P4-201ENST00000456554 838 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AC105910.1-201ENST00000482585 483 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 RN7SL314P-201ENST00000490735 292 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AC112198.1-201ENST00000505369 1220 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AC021146.7-201ENST00000509604 775 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 C1GALT1P3-201ENST00000522049 819 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AC135983.3-201ENST00000528049 1226 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 NDUFA5P11-201ENST00000567995 343 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AC012414.6-201ENST00000568241 401 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AC040162.2-201ENST00000573092 157 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 DYM-207ENST00000578396 755 ntTSL 3 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AP001025.3-201ENST00000578787 864 ntTSL 3 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AC005730.3-201ENST00000583067 366 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 LINC01483-205ENST00000591334 620 ntTSL 4 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 NDUFA8P1-201ENST00000605525 367 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 RN7SL113P-201ENST00000619959 299 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AL022318.4-202ENST00000622217 591 ntTSL 5 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AL157786.1-207ENST00000627771 695 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 AL031651.1-201ENST00000615357 1438 ntBASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 SOX9-AS1-217ENST00000623935 1563 ntTSL 5 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
FOXR1Q6PIV2 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms