Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC127502.2-201ENST00000602663 2351 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 RNU6-553P-201ENST00000364047 96 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 SNORD94-201ENST00000386037 137 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AL136310.1-201ENST00000404926 654 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AL136100.1-201ENST00000407696 330 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 ALDH7A1P4-201ENST00000412255 178 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 MTCYBP38-201ENST00000417160 1123 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 TRGV5P-201ENST00000419915 354 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 VN1R54P-201ENST00000435210 1049 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC009518.3-201ENST00000438972 253 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 MTCO1P19-201ENST00000443487 500 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 MRPL35P4-201ENST00000453682 566 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 SUMO2P2-201ENST00000456482 255 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC005410.1-202ENST00000460347 485 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC126182.1-201ENST00000478134 357 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 GAPDHP71-201ENST00000511530 1003 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC025465.4-201ENST00000513422 638 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 MTCYBP44-201ENST00000514835 823 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 RN7SKP11-201ENST00000517018 287 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 GLYCAM1-201ENST00000546596 285 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC245505.1-201ENST00000556398 224 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 STX8-209ENST00000574431 731 ntTSL 3 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 MIR3157-201ENST00000578688 85 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC124283.4-201ENST00000581815 456 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC024267.2-201ENST00000582737 417 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC090616.1-201ENST00000583895 447 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC090616.2-202ENST00000584248 222 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC019257.2-201ENST00000605539 497 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AL161420.1-201ENST00000619393 264 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC099654.5-201ENST00000636479 350 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC027279.4-201ENST00000624371 2072 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC006042.3-201ENST00000454684 1469 ntBASIC9.26□□□□□ -0.93
RC3H1Q5TC82 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RC3H1Q5TC82 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 OR4G2P-201ENST00000328113 903 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 U3.28-201ENST00000391249 210 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AL139806.1-201ENST00000403057 1002 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 CENPIP1-201ENST00000425713 902 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AL593851.1-201ENST00000426171 157 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 LINC00328-2P-201ENST00000436585 219 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AC241584.1-201ENST00000438469 1241 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 RPL7P45-201ENST00000455851 743 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AC019084.1-201ENST00000457337 432 ntBASIC9.25□□□□□ -0.93
RC3H1Q5TC82 AL591122.1-201ENST00000487348 492 ntBASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms