Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN20P56880 MTCO1P1-201ENST00000624263 1081 ntBASIC5.99□□□□□ -1.45
CLDN20P56880 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.99□□□□□ -1.45
CLDN20P56880 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.99□□□□□ -1.45
CLDN20P56880 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN20P56880 LCOR-201ENST00000286067 4542 ntBASIC5.99□□□□□ -1.45
CLDN20P56880 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.99□□□□□ -1.45
CLDN20P56880 AC020658.2-201ENST00000559030 4020 ntBASIC5.99□□□□□ -1.45
CLDN20P56880 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.99□□□□□ -1.45
CLDN20P56880 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.99□□□□□ -1.45
CLDN20P56880 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.99□□□□□ -1.45
CLDN20P56880 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN20P56880 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN20P56880 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN20P56880 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN20P56880 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
CLDN20P56880 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN20P56880 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLDN20P56880 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
CLDN20P56880 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CLDN20P56880 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CLDN20P56880 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.98□□□□□ -1.45
CLDN20P56880 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CLDN20P56880 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 RN7SKP184-201ENST00000362348 333 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 RNU4-23P-201ENST00000362839 140 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 U3.52-201ENST00000384034 216 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CLDN20P56880 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.98□□□□□ -1.45
CLDN20P56880 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.98□□□□□ -1.45
CLDN20P56880 FAM183DP-201ENST00000421987 399 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 NPM1P48-201ENST00000436002 853 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 AC092106.2-201ENST00000436597 487 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.98□□□□□ -1.45
CLDN20P56880 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.98□□□□□ -1.45
CLDN20P56880 NPM1P23-201ENST00000440193 849 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.98□□□□□ -1.45
CLDN20P56880 GAPDHP33-201ENST00000443168 1013 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 AC092601.1-201ENST00000444526 383 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.98□□□□□ -1.45
CLDN20P56880 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.98□□□□□ -1.45
CLDN20P56880 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.98□□□□□ -1.45
CLDN20P56880 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.98□□□□□ -1.45
CLDN20P56880 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.98□□□□□ -1.45
CLDN20P56880 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.98□□□□□ -1.45
CLDN20P56880 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CLDN20P56880 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CLDN20P56880 AC067805.1-201ENST00000559344 470 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.98□□□□□ -1.45
CLDN20P56880 MIR212-201ENST00000586026 110 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.98□□□□□ -1.45
CLDN20P56880 AC009303.3-201ENST00000591103 736 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.98□□□□□ -1.45
CLDN20P56880 AC245052.7-201ENST00000601161 359 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 AC087468.1-201ENST00000604365 630 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.98□□□□□ -1.45
CLDN20P56880 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 AC006213.5-201ENST00000619673 288 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.98□□□□□ -1.45
CLDN20P56880 AL118508.4-201ENST00000624142 1176 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.98□□□□□ -1.45
CLDN20P56880 AC007603.3-201ENST00000636915 979 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 AL161901.1-201ENST00000624954 3425 ntBASIC5.98□□□□□ -1.45
CLDN20P56880 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.98□□□□□ -1.45
CLDN20P56880 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.98□□□□□ -1.45
CLDN20P56880 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.98□□□□□ -1.45
CLDN20P56880 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLDN20P56880 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.97□□□□□ -1.45
CLDN20P56880 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CLDN20P56880 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLDN20P56880 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.97□□□□□ -1.45
CLDN20P56880 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLDN20P56880 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLDN20P56880 RNA5SP85-201ENST00000365378 119 ntBASIC5.97□□□□□ -1.45
CLDN20P56880 TRAV35-201ENST00000390462 330 ntBASIC5.97□□□□□ -1.45
CLDN20P56880 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CLDN20P56880 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLDN20P56880 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.97□□□□□ -1.45
CLDN20P56880 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms