Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LHX1P48742 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LHX1P48742 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.73□□□□□ -1.33
LHX1P48742 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LHX1P48742 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LHX1P48742 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LHX1P48742 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
LHX1P48742 AC061975.7-201ENST00000592016 2692 ntBASIC6.73□□□□□ -1.33
LHX1P48742 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
LHX1P48742 SMC4P1-201ENST00000414479 527 ntBASIC6.73□□□□□ -1.33
LHX1P48742 AC009500.1-201ENST00000420684 583 ntBASIC6.73□□□□□ -1.33
LHX1P48742 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.73□□□□□ -1.33
LHX1P48742 AL121578.1-201ENST00000428051 892 ntBASIC6.73□□□□□ -1.33
LHX1P48742 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LHX1P48742 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LHX1P48742 RPL5P7-201ENST00000444235 813 ntBASIC6.73□□□□□ -1.33
LHX1P48742 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.73□□□□□ -1.33
LHX1P48742 MORF4-201ENST00000447135 971 ntBASIC6.73□□□□□ -1.33
LHX1P48742 AP002453.1-201ENST00000492327 668 ntBASIC6.73□□□□□ -1.33
LHX1P48742 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.73□□□□□ -1.33
LHX1P48742 HMGN1P17-201ENST00000513734 295 ntBASIC6.73□□□□□ -1.33
LHX1P48742 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.73□□□□□ -1.33
LHX1P48742 NATP-201ENST00000523491 878 ntBASIC6.73□□□□□ -1.33
LHX1P48742 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.73□□□□□ -1.33
LHX1P48742 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LHX1P48742 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.73□□□□□ -1.33
LHX1P48742 AC073916.1-201ENST00000545095 130 ntBASIC6.73□□□□□ -1.33
LHX1P48742 AL845552.1-201ENST00000556820 323 ntBASIC6.73□□□□□ -1.33
LHX1P48742 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.73□□□□□ -1.33
LHX1P48742 AC073592.6-201ENST00000624271 415 ntBASIC6.73□□□□□ -1.33
LHX1P48742 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.73□□□□□ -1.33
LHX1P48742 AL591848.4-201ENST00000567832 3472 ntBASIC6.73□□□□□ -1.33
LHX1P48742 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LHX1P48742 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.73□□□□□ -1.33
LHX1P48742 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LHX1P48742 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LHX1P48742 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LHX1P48742 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
LHX1P48742 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LHX1P48742 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LHX1P48742 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.72□□□□□ -1.33
LHX1P48742 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.72□□□□□ -1.33
LHX1P48742 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.72□□□□□ -1.33
LHX1P48742 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
LHX1P48742 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
LHX1P48742 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.72□□□□□ -1.33
LHX1P48742 AC010329.1-201ENST00000593903 8328 ntBASIC6.72□□□□□ -1.33
LHX1P48742 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.72□□□□□ -1.33
LHX1P48742 CXADRP1-201ENST00000398098 1095 ntBASIC6.72□□□□□ -1.33
LHX1P48742 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.72□□□□□ -1.33
LHX1P48742 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LHX1P48742 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.72□□□□□ -1.33
LHX1P48742 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.72□□□□□ -1.33
LHX1P48742 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.72□□□□□ -1.33
LHX1P48742 AC010240.2-201ENST00000445363 1205 ntBASIC6.72□□□□□ -1.33
LHX1P48742 RBMY2AP-201ENST00000445405 1157 ntBASIC6.72□□□□□ -1.33
LHX1P48742 RBMY2CP-201ENST00000448575 1157 ntBASIC6.72□□□□□ -1.33
LHX1P48742 RBMY2DP-202ENST00000448881 1157 ntBASIC6.72□□□□□ -1.33
LHX1P48742 VPS25P1-201ENST00000455691 508 ntBASIC6.72□□□□□ -1.33
LHX1P48742 RN7SL170P-201ENST00000487098 295 ntBASIC6.72□□□□□ -1.33
LHX1P48742 RPL12P30-201ENST00000488389 499 ntBASIC6.72□□□□□ -1.33
LHX1P48742 AC111000.5-201ENST00000506559 1178 ntBASIC6.72□□□□□ -1.33
LHX1P48742 MAST4-IT1-201ENST00000514241 658 ntBASIC6.72□□□□□ -1.33
LHX1P48742 OR7E158P-201ENST00000524483 910 ntBASIC6.72□□□□□ -1.33
LHX1P48742 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.72□□□□□ -1.33
LHX1P48742 DPPA3P2-201ENST00000553589 478 ntBASIC6.72□□□□□ -1.33
LHX1P48742 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.72□□□□□ -1.33
LHX1P48742 MIR4502-201ENST00000580432 81 ntBASIC6.72□□□□□ -1.33
LHX1P48742 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.72□□□□□ -1.33
LHX1P48742 AC233702.7-202ENST00000582941 211 ntBASIC6.72□□□□□ -1.33
LHX1P48742 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.72□□□□□ -1.33
LHX1P48742 AC010998.3-201ENST00000613871 631 ntBASIC6.72□□□□□ -1.33
LHX1P48742 CXADRP3-202ENST00000617265 1100 ntBASIC6.72□□□□□ -1.33
LHX1P48742 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.72□□□□□ -1.33
LHX1P48742 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.72□□□□□ -1.33
LHX1P48742 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LHX1P48742 HCFC2P1-201ENST00000392864 1592 ntBASIC6.72□□□□□ -1.33
LHX1P48742 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LHX1P48742 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.72□□□□□ -1.33
LHX1P48742 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
LHX1P48742 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
LHX1P48742 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.72□□□□□ -1.33
LHX1P48742 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
LHX1P48742 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
LHX1P48742 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
LHX1P48742 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
LHX1P48742 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
LHX1P48742 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
LHX1P48742 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.71□□□□□ -1.33
LHX1P48742 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
LHX1P48742 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
LHX1P48742 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.71□□□□□ -1.33
LHX1P48742 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
LHX1P48742 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
LHX1P48742 DOCK11P1-201ENST00000553480 5932 ntBASIC6.71□□□□□ -1.33
LHX1P48742 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LHX1P48742 AL589993.1-201ENST00000407450 2524 ntBASIC6.71□□□□□ -1.34
LHX1P48742 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
LHX1P48742 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
LHX1P48742 OOSP1-201ENST00000398992 1270 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms