Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CASP1P29466 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CASP1P29466 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CASP1P29466 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CASP1P29466 AL451046.1-201ENST00000406097 534 ntBASIC6.95□□□□□ -1.3
CASP1P29466 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.95□□□□□ -1.3
CASP1P29466 GPN3P1-201ENST00000423883 535 ntBASIC6.95□□□□□ -1.3
CASP1P29466 AL354707.3-201ENST00000427308 331 ntBASIC6.95□□□□□ -1.3
CASP1P29466 OR2L9P-201ENST00000444456 913 ntBASIC6.95□□□□□ -1.3
CASP1P29466 OR13K1P-201ENST00000444577 975 ntBASIC6.95□□□□□ -1.3
CASP1P29466 AC234771.2-201ENST00000445718 597 ntBASIC6.95□□□□□ -1.3
CASP1P29466 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.95□□□□□ -1.3
CASP1P29466 RPS4XP17-201ENST00000479057 754 ntBASIC6.95□□□□□ -1.3
CASP1P29466 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.95□□□□□ -1.3
CASP1P29466 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.95□□□□□ -1.3
CASP1P29466 AC008945.1-201ENST00000505144 499 ntBASIC6.95□□□□□ -1.3
CASP1P29466 MRPL57P6-201ENST00000506570 309 ntBASIC6.95□□□□□ -1.3
CASP1P29466 OR4D12P-201ENST00000509361 911 ntBASIC6.95□□□□□ -1.3
CASP1P29466 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.95□□□□□ -1.3
CASP1P29466 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.95□□□□□ -1.3
CASP1P29466 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.95□□□□□ -1.3
CASP1P29466 AP001858.2-201ENST00000536213 601 ntBASIC6.95□□□□□ -1.3
CASP1P29466 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.95□□□□□ -1.3
CASP1P29466 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.95□□□□□ -1.3
CASP1P29466 MIR3157-201ENST00000578688 85 ntBASIC6.95□□□□□ -1.3
CASP1P29466 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.95□□□□□ -1.3
CASP1P29466 AC026898.1-201ENST00000586404 571 ntBASIC6.95□□□□□ -1.3
CASP1P29466 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.95□□□□□ -1.3
CASP1P29466 AC027334.1-201ENST00000603257 310 ntBASIC6.95□□□□□ -1.3
CASP1P29466 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.95□□□□□ -1.3
CASP1P29466 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CASP1P29466 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CASP1P29466 AL122023.1-201ENST00000622847 530 ntBASIC6.95□□□□□ -1.3
CASP1P29466 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.95□□□□□ -1.3
CASP1P29466 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.95□□□□□ -1.3
CASP1P29466 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CASP1P29466 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CASP1P29466 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.95□□□□□ -1.3
CASP1P29466 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
CASP1P29466 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CASP1P29466 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CASP1P29466 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CASP1P29466 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CASP1P29466 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.94□□□□□ -1.3
CASP1P29466 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CASP1P29466 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.94□□□□□ -1.3
CASP1P29466 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CASP1P29466 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CASP1P29466 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CASP1P29466 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
CASP1P29466 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
CASP1P29466 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CASP1P29466 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.94□□□□□ -1.3
CASP1P29466 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.94□□□□□ -1.3
CASP1P29466 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.94□□□□□ -1.3
CASP1P29466 RNA5SP346-201ENST00000363541 121 ntBASIC6.94□□□□□ -1.3
CASP1P29466 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.94□□□□□ -1.3
CASP1P29466 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.94□□□□□ -1.3
CASP1P29466 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.94□□□□□ -1.3
CASP1P29466 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.94□□□□□ -1.3
CASP1P29466 GAPDHP23-201ENST00000444823 993 ntBASIC6.94□□□□□ -1.3
CASP1P29466 MORF4-201ENST00000447135 971 ntBASIC6.94□□□□□ -1.3
CASP1P29466 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.94□□□□□ -1.3
CASP1P29466 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.94□□□□□ -1.3
CASP1P29466 Y_RNA.710-201ENST00000516975 110 ntBASIC6.94□□□□□ -1.3
CASP1P29466 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.94□□□□□ -1.3
CASP1P29466 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.94□□□□□ -1.3
CASP1P29466 TDGP1-201ENST00000543961 1229 ntBASIC6.94□□□□□ -1.3
CASP1P29466 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.94□□□□□ -1.3
CASP1P29466 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.94□□□□□ -1.3
CASP1P29466 AC020916.2-201ENST00000591242 360 ntBASIC6.94□□□□□ -1.3
CASP1P29466 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.94□□□□□ -1.3
CASP1P29466 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.94□□□□□ -1.3
CASP1P29466 AL137067.2-201ENST00000621202 131 ntBASIC6.94□□□□□ -1.3
CASP1P29466 AL138693.1-201ENST00000622219 129 ntBASIC6.94□□□□□ -1.3
CASP1P29466 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CASP1P29466 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.94□□□□□ -1.3
CASP1P29466 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
CASP1P29466 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.94□□□□□ -1.3
CASP1P29466 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CASP1P29466 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CASP1P29466 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CASP1P29466 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
CASP1P29466 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CASP1P29466 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CASP1P29466 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CASP1P29466 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CASP1P29466 AC073365.1-203ENST00000641055 1992 ntBASIC6.93□□□□□ -1.3
CASP1P29466 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CASP1P29466 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CASP1P29466 AC022164.1-201ENST00000568767 2673 ntBASIC6.93□□□□□ -1.3
CASP1P29466 RNU1-49P-201ENST00000363468 159 ntBASIC6.93□□□□□ -1.3
CASP1P29466 RNA5SP485-201ENST00000365053 119 ntBASIC6.93□□□□□ -1.3
CASP1P29466 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.93□□□□□ -1.3
CASP1P29466 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CASP1P29466 AC094019.1-201ENST00000434678 472 ntBASIC6.93□□□□□ -1.3
CASP1P29466 LINC00328-2P-201ENST00000436585 219 ntBASIC6.93□□□□□ -1.3
CASP1P29466 EMC3-AS1-205ENST00000438698 534 ntBASIC6.93□□□□□ -1.3
CASP1P29466 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.93□□□□□ -1.3
CASP1P29466 SOCS5P1-201ENST00000440415 949 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms