Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC8.21□□□□□ -1.1
VARSP26640 AC026464.2-201ENST00000567834 2421 ntBASIC8.21□□□□□ -1.1
VARSP26640 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
VARSP26640 PABPC1P9-201ENST00000426076 1612 ntBASIC8.21□□□□□ -1.1
VARSP26640 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC8.21□□□□□ -1.1
VARSP26640 NEPNP-201ENST00000404786 1371 ntBASIC8.21□□□□□ -1.1
VARSP26640 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
VARSP26640 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC8.21□□□□□ -1.1
VARSP26640 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 AL162171.3-201ENST00000617439 3178 ntBASIC8.2□□□□□ -1.1
VARSP26640 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 AC009044.1-201ENST00000624577 1798 ntBASIC8.2□□□□□ -1.1
VARSP26640 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC8.2□□□□□ -1.1
VARSP26640 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC8.2□□□□□ -1.1
VARSP26640 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC8.2□□□□□ -1.1
VARSP26640 FO393411.1-201ENST00000325612 420 ntBASIC8.2□□□□□ -1.1
VARSP26640 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 RN7SKP239-201ENST00000364814 295 ntBASIC8.2□□□□□ -1.1
VARSP26640 RNA5SP80-201ENST00000410475 111 ntBASIC8.2□□□□□ -1.1
VARSP26640 RN7SKP181-201ENST00000411188 316 ntBASIC8.2□□□□□ -1.1
VARSP26640 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC8.2□□□□□ -1.1
VARSP26640 AL035458.1-201ENST00000433096 585 ntBASIC8.2□□□□□ -1.1
VARSP26640 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC8.2□□□□□ -1.1
VARSP26640 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC8.2□□□□□ -1.1
VARSP26640 AL109945.1-201ENST00000448134 687 ntTSL 2 BASIC8.2□□□□□ -1.1
VARSP26640 AL591363.1-201ENST00000450091 483 ntBASIC8.2□□□□□ -1.1
VARSP26640 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC8.2□□□□□ -1.1
VARSP26640 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC8.2□□□□□ -1.1
VARSP26640 RPS27AP2-201ENST00000457576 465 ntBASIC8.2□□□□□ -1.1
VARSP26640 AC115223.1-201ENST00000466377 870 ntBASIC8.2□□□□□ -1.1
VARSP26640 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC8.2□□□□□ -1.1
VARSP26640 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC8.2□□□□□ -1.1
VARSP26640 AC010307.4-202ENST00000507403 389 ntTSL 3 BASIC8.2□□□□□ -1.1
VARSP26640 AC098679.2-201ENST00000513067 365 ntTSL 2 BASIC8.2□□□□□ -1.1
VARSP26640 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC8.2□□□□□ -1.1
VARSP26640 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC8.2□□□□□ -1.1
VARSP26640 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC8.2□□□□□ -1.1
VARSP26640 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC8.2□□□□□ -1.1
VARSP26640 AP000445.1-201ENST00000526692 741 ntBASIC8.2□□□□□ -1.1
VARSP26640 NPIPB14P-203ENST00000532298 987 ntBASIC8.2□□□□□ -1.1
VARSP26640 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC8.2□□□□□ -1.1
VARSP26640 AC008127.2-201ENST00000549925 1075 ntBASIC8.2□□□□□ -1.1
VARSP26640 SMARCE1P3-201ENST00000553649 1231 ntBASIC8.2□□□□□ -1.1
VARSP26640 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC8.2□□□□□ -1.1
VARSP26640 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC8.2□□□□□ -1.1
VARSP26640 LINC02295-201ENST00000557072 374 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 NPM1P5-201ENST00000557228 838 ntBASIC8.2□□□□□ -1.1
VARSP26640 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC8.2□□□□□ -1.1
VARSP26640 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC8.2□□□□□ -1.1
VARSP26640 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC8.2□□□□□ -1.1
VARSP26640 AC005726.4-201ENST00000582858 458 ntBASIC8.2□□□□□ -1.1
VARSP26640 AC006557.4-201ENST00000585516 830 ntBASIC8.2□□□□□ -1.1
VARSP26640 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC8.2□□□□□ -1.1
VARSP26640 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC8.2□□□□□ -1.1
VARSP26640 AC060780.3-201ENST00000589464 80 ntBASIC8.2□□□□□ -1.1
VARSP26640 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC8.2□□□□□ -1.1
VARSP26640 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 LGALS17A-205ENST00000598736 1111 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 AL021878.2-201ENST00000602718 399 ntBASIC8.2□□□□□ -1.1
VARSP26640 AL020991.1-201ENST00000612314 373 ntBASIC8.2□□□□□ -1.1
VARSP26640 AC010542.5-201ENST00000612427 382 ntBASIC8.2□□□□□ -1.1
VARSP26640 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC8.2□□□□□ -1.1
VARSP26640 AL031772.1-216ENST00000619494 697 ntTSL 5 BASIC8.2□□□□□ -1.1
VARSP26640 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC8.2□□□□□ -1.1
VARSP26640 AP003122.6-201ENST00000623831 495 ntBASIC8.2□□□□□ -1.1
VARSP26640 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 MIR3191-201ENST00000636300 76 ntBASIC8.2□□□□□ -1.1
VARSP26640 ZNF410-225ENST00000639051 936 ntTSL 5 BASIC8.2□□□□□ -1.1
VARSP26640 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 AC017007.4-201ENST00000503353 1352 ntBASIC8.2□□□□□ -1.1
VARSP26640 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 AC016582.1-201ENST00000592640 1716 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 AC009166.2-201ENST00000624410 2833 ntBASIC8.2□□□□□ -1.1
VARSP26640 CWC27-204ENST00000508024 2103 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 AC127070.5-201ENST00000623177 2104 ntBASIC8.2□□□□□ -1.1
VARSP26640 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC8.2□□□□□ -1.1
VARSP26640 CASC19-206ENST00000641028 1430 ntBASIC8.2□□□□□ -1.1
VARSP26640 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
VARSP26640 SLC2A3P4-201ENST00000521259 1471 ntBASIC8.19□□□□□ -1.1
VARSP26640 IMPG1-204ENST00000611179 3324 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
VARSP26640 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC8.19□□□□□ -1.1
VARSP26640 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC8.19□□□□□ -1.1
VARSP26640 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 ZNF207-202ENST00000342555 1905 ntTSL 5 BASIC8.19□□□□□ -1.1
VARSP26640 ZNF331-216ENST00000511593 1985 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
VARSP26640 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
VARSP26640 AC010886.1-201ENST00000437380 2869 ntBASIC8.19□□□□□ -1.1
VARSP26640 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.19□□□□□ -1.1
VARSP26640 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms