Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC5.74□□□□□ -1.49
FREM3P0C091 LCOR-201ENST00000286067 4542 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FREM3P0C091 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.73□□□□□ -1.49
FREM3P0C091 AL157831.2-201ENST00000564681 3095 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FREM3P0C091 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FREM3P0C091 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.73□□□□□ -1.49
FREM3P0C091 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
FREM3P0C091 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FREM3P0C091 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.73□□□□□ -1.49
FREM3P0C091 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
FREM3P0C091 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.73□□□□□ -1.49
FREM3P0C091 MIR1282-201ENST00000408865 101 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 AL353626.3-201ENST00000413399 657 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.73□□□□□ -1.49
FREM3P0C091 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.73□□□□□ -1.49
FREM3P0C091 AC009963.3-201ENST00000458090 486 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.73□□□□□ -1.49
FREM3P0C091 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.73□□□□□ -1.49
FREM3P0C091 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.73□□□□□ -1.49
FREM3P0C091 OR4D12P-201ENST00000509361 911 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 AC009879.1-201ENST00000520029 839 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
FREM3P0C091 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
FREM3P0C091 AC002310.3-201ENST00000569728 723 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 MIR4301-201ENST00000577203 66 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 MIR3154-201ENST00000577829 84 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 MIR4701-201ENST00000583094 63 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 uc_338.31-201ENST00000615595 186 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 AL512652.1-201ENST00000619006 500 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 AC073592.6-201ENST00000624271 415 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 AC073593.1-201ENST00000624500 411 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.73□□□□□ -1.49
FREM3P0C091 AL034408.1-201ENST00000637712 664 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
FREM3P0C091 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
FREM3P0C091 AC022507.1-201ENST00000548349 1505 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.73□□□□□ -1.49
FREM3P0C091 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FREM3P0C091 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
FREM3P0C091 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.73□□□□□ -1.49
FREM3P0C091 AC006511.3-201ENST00000624929 1783 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.73□□□□□ -1.49
FREM3P0C091 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC5.73□□□□□ -1.49
FREM3P0C091 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FREM3P0C091 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
FREM3P0C091 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FREM3P0C091 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
FREM3P0C091 VN2R1P-201ENST00000449668 1743 ntBASIC5.73□□□□□ -1.49
FREM3P0C091 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FREM3P0C091 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FREM3P0C091 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
FREM3P0C091 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FREM3P0C091 AL360013.1-201ENST00000419031 858 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.72□□□□□ -1.49
FREM3P0C091 AC003989.1-201ENST00000434569 565 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.72□□□□□ -1.49
FREM3P0C091 Z83838.1-202ENST00000456225 839 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 RN7SL326P-201ENST00000477493 296 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 IGHV1-14-201ENST00000523391 241 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.72□□□□□ -1.49
FREM3P0C091 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.72□□□□□ -1.49
FREM3P0C091 NANOGNBP2-201ENST00000544753 553 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 RN7SL230P-201ENST00000580835 303 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 AC134669.1-201ENST00000581275 672 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 AC233702.7-202ENST00000582941 211 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 SNORA74.4-201ENST00000607595 199 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 AP001052.1-201ENST00000626421 99 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
FREM3P0C091 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FREM3P0C091 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FREM3P0C091 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FREM3P0C091 AC062022.1-201ENST00000451026 1684 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.72□□□□□ -1.49
FREM3P0C091 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.72□□□□□ -1.49
FREM3P0C091 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
FREM3P0C091 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FREM3P0C091 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
FREM3P0C091 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
FREM3P0C091 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
FREM3P0C091 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC5.72□□□□□ -1.49
FREM3P0C091 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
FREM3P0C091 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.72□□□□□ -1.49
FREM3P0C091 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.72□□□□□ -1.49
FREM3P0C091 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.72□□□□□ -1.49
FREM3P0C091 RNU1-49P-201ENST00000363468 159 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
FREM3P0C091 AL023284.3-201ENST00000407767 334 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.72□□□□□ -1.49
FREM3P0C091 PSMD10P2-201ENST00000432890 672 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.72□□□□□ -1.49
FREM3P0C091 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.72□□□□□ -1.49
FREM3P0C091 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FREM3P0C091 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.72□□□□□ -1.49
FREM3P0C091 RN7SKP288-201ENST00000516227 268 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 OR6M2P-201ENST00000529831 871 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms