Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC187A0A096LP49 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 RNU1-84P-201ENST00000365447 164 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 MRPS6P2-201ENST00000381143 370 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 UBE2V1P15-201ENST00000407776 448 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AC115283.1-201ENST00000427353 400 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AL392003.1-201ENST00000434394 243 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AC074367.1-201ENST00000438685 1125 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 GAPDHP33-201ENST00000443168 1013 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 OR52I1-201ENST00000450052 1050 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AL353718.1-201ENST00000451028 517 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 EIF4A2P2-201ENST00000455776 1070 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 OR52H2P-201ENST00000514607 902 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 OR4A42P-201ENST00000531397 938 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AC026956.1-201ENST00000558741 396 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 CTSLP2-201ENST00000580501 394 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AC245052.7-201ENST00000601161 359 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AC009948.4-201ENST00000604692 675 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AL135999.3-201ENST00000610501 812 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 RN7SL261P-201ENST00000613441 282 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AL590410.1-201ENST00000617925 333 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AL590396.2-201ENST00000636511 1041 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 PSMC1P6-201ENST00000477233 1319 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AL031651.1-201ENST00000615357 1438 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 Z93929.1-201ENST00000418200 1475 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 SPATA31C2-201ENST00000324915 3777 ntBASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC187A0A096LP49 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 CDY11P-201ENST00000447168 1651 ntBASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 AL132656.3-201ENST00000606384 1595 ntBASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 AC083899.2-201ENST00000423285 1376 ntBASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 SNORA70.3-201ENST00000365075 132 ntBASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 MIR188-201ENST00000385034 86 ntBASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 AL773545.3-201ENST00000414297 706 ntBASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 MTND4LP21-201ENST00000415303 295 ntBASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 AL929472.1-201ENST00000417484 429 ntBASIC6.37□□□□□ -1.39
CCDC187A0A096LP49 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms