Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 AL157831.2-201ENST00000564681 3095 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 TCP11X1-202ENST00000622971 1372 ntBASIC4.78□□□□□ -1.64
AP1S3Q96PC3 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.78□□□□□ -1.64
AP1S3Q96PC3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.78□□□□□ -1.65
AP1S3Q96PC3 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 RN7SKP81-201ENST00000365603 331 ntBASIC4.77□□□□□ -1.65
AP1S3Q96PC3 NPM1P31-201ENST00000399021 764 ntBASIC4.77□□□□□ -1.65
AP1S3Q96PC3 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AL590128.1-201ENST00000433407 286 ntBASIC4.77□□□□□ -1.65
AP1S3Q96PC3 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 SNORA35.1-201ENST00000458908 128 ntBASIC4.77□□□□□ -1.65
AP1S3Q96PC3 PPP1R2P6-201ENST00000478565 588 ntBASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AL135933.1-201ENST00000498657 802 ntBASIC4.77□□□□□ -1.65
AP1S3Q96PC3 NPM1P27-201ENST00000502784 830 ntBASIC4.77□□□□□ -1.65
AP1S3Q96PC3 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AC140063.1-201ENST00000541343 259 ntBASIC4.77□□□□□ -1.65
AP1S3Q96PC3 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AL162632.2-201ENST00000553933 399 ntBASIC4.77□□□□□ -1.65
AP1S3Q96PC3 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AC092960.1-201ENST00000604762 351 ntBASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AL590032.1-201ENST00000604920 252 ntBASIC4.77□□□□□ -1.65
AP1S3Q96PC3 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AC010320.5-201ENST00000619124 676 ntBASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AC140479.4-205ENST00000636339 820 ntBASIC4.77□□□□□ -1.65
AP1S3Q96PC3 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AL355488.2-201ENST00000609909 2850 ntBASIC4.77□□□□□ -1.65
AP1S3Q96PC3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 AC004158.1-201ENST00000564508 4319 ntBASIC4.77□□□□□ -1.65
AP1S3Q96PC3 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
AP1S3Q96PC3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 AP001284.1-201ENST00000528393 2118 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 LINC01616-201ENST00000561816 2280 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 SNORA38B-201ENST00000363524 131 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 SNORA30B-201ENST00000365319 129 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 MIR128-2-201ENST00000384893 84 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 TMA16P2-201ENST00000413187 601 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 CYCSP52-201ENST00000422857 310 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 ZNF101P1-201ENST00000435701 1720 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 PFN1P11-201ENST00000445829 389 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 RPL23AP28-201ENST00000448062 470 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 RN7SL145P-201ENST00000469955 296 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 RN7SL314P-201ENST00000490735 292 ntBASIC4.76□□□□□ -1.65
AP1S3Q96PC3 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.76□□□□□ -1.65
AP1S3Q96PC3 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms