Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.83□□□□□ -1.32
HDAC4P56524 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
HDAC4P56524 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
HDAC4P56524 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.83□□□□□ -1.32
HDAC4P56524 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HDAC4P56524 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HDAC4P56524 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HDAC4P56524 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HDAC4P56524 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HDAC4P56524 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.83□□□□□ -1.32
HDAC4P56524 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HDAC4P56524 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.83□□□□□ -1.32
HDAC4P56524 AP002370.1-201ENST00000528055 1602 ntBASIC6.83□□□□□ -1.32
HDAC4P56524 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.83□□□□□ -1.32
HDAC4P56524 AC010624.4-201ENST00000597606 1351 ntBASIC6.82□□□□□ -1.32
HDAC4P56524 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.82□□□□□ -1.32
HDAC4P56524 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HDAC4P56524 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
HDAC4P56524 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
HDAC4P56524 AC083837.1-201ENST00000565297 2994 ntBASIC6.82□□□□□ -1.32
HDAC4P56524 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HDAC4P56524 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HDAC4P56524 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HDAC4P56524 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HDAC4P56524 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HDAC4P56524 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HDAC4P56524 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.82□□□□□ -1.32
HDAC4P56524 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.82□□□□□ -1.32
HDAC4P56524 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.82□□□□□ -1.32
HDAC4P56524 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.82□□□□□ -1.32
HDAC4P56524 AL023284.3-201ENST00000407767 334 ntBASIC6.82□□□□□ -1.32
HDAC4P56524 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.82□□□□□ -1.32
HDAC4P56524 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HDAC4P56524 AC234771.4-201ENST00000441416 730 ntBASIC6.82□□□□□ -1.32
HDAC4P56524 NPM1P9-201ENST00000453156 844 ntBASIC6.82□□□□□ -1.32
HDAC4P56524 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.82□□□□□ -1.32
HDAC4P56524 RPSAP24-201ENST00000461543 873 ntBASIC6.82□□□□□ -1.32
HDAC4P56524 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HDAC4P56524 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.82□□□□□ -1.32
HDAC4P56524 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.82□□□□□ -1.32
HDAC4P56524 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
HDAC4P56524 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.82□□□□□ -1.32
HDAC4P56524 MTND2P7-201ENST00000521337 640 ntBASIC6.82□□□□□ -1.32
HDAC4P56524 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.82□□□□□ -1.32
HDAC4P56524 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.82□□□□□ -1.32
HDAC4P56524 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.82□□□□□ -1.32
HDAC4P56524 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.82□□□□□ -1.32
HDAC4P56524 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
HDAC4P56524 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.82□□□□□ -1.32
HDAC4P56524 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.82□□□□□ -1.32
HDAC4P56524 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HDAC4P56524 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HDAC4P56524 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.82□□□□□ -1.32
HDAC4P56524 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.82□□□□□ -1.32
HDAC4P56524 AC067852.5-201ENST00000589299 310 ntBASIC6.82□□□□□ -1.32
HDAC4P56524 AC114477.1-201ENST00000605097 605 ntBASIC6.82□□□□□ -1.32
HDAC4P56524 AC097467.4-201ENST00000605504 141 ntBASIC6.82□□□□□ -1.32
HDAC4P56524 AL353729.2-201ENST00000605859 1249 ntBASIC6.82□□□□□ -1.32
HDAC4P56524 AL352984.2-202ENST00000613699 155 ntBASIC6.82□□□□□ -1.32
HDAC4P56524 AP003789.1-201ENST00000617737 605 ntBASIC6.82□□□□□ -1.32
HDAC4P56524 MIR7854-201ENST00000620068 65 ntBASIC6.82□□□□□ -1.32
HDAC4P56524 AP001264.1-201ENST00000620602 703 ntBASIC6.82□□□□□ -1.32
HDAC4P56524 AC012254.5-201ENST00000623573 478 ntBASIC6.82□□□□□ -1.32
HDAC4P56524 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.82□□□□□ -1.32
HDAC4P56524 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HDAC4P56524 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HDAC4P56524 AL359694.2-201ENST00000567753 1615 ntBASIC6.82□□□□□ -1.32
HDAC4P56524 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HDAC4P56524 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HDAC4P56524 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
HDAC4P56524 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
HDAC4P56524 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.82□□□□□ -1.32
HDAC4P56524 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.82□□□□□ -1.32
HDAC4P56524 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HDAC4P56524 AL049634.1-201ENST00000453770 1720 ntBASIC6.81□□□□□ -1.32
HDAC4P56524 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HDAC4P56524 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
HDAC4P56524 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.81□□□□□ -1.32
HDAC4P56524 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
HDAC4P56524 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.81□□□□□ -1.32
HDAC4P56524 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HDAC4P56524 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.81□□□□□ -1.32
HDAC4P56524 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
HDAC4P56524 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
HDAC4P56524 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HDAC4P56524 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HDAC4P56524 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
HDAC4P56524 AL451142.1-201ENST00000375867 775 ntBASIC6.81□□□□□ -1.32
HDAC4P56524 MRPS6P2-201ENST00000381143 370 ntBASIC6.81□□□□□ -1.32
HDAC4P56524 MIR1266-201ENST00000408125 84 ntBASIC6.81□□□□□ -1.32
HDAC4P56524 RANP6-201ENST00000413691 644 ntBASIC6.81□□□□□ -1.32
HDAC4P56524 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.81□□□□□ -1.32
HDAC4P56524 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HDAC4P56524 PSMD8P1-201ENST00000436275 769 ntBASIC6.81□□□□□ -1.32
HDAC4P56524 COL11A2P1-205ENST00000441798 676 ntBASIC6.81□□□□□ -1.32
HDAC4P56524 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.81□□□□□ -1.32
HDAC4P56524 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.81□□□□□ -1.32
HDAC4P56524 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.81□□□□□ -1.32
HDAC4P56524 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
HDAC4P56524 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms