Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 AC007406.5-201ENST00000570140 3170 ntBASIC7.57□□□□□ -1.2
PMS1P54277 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PMS1P54277 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.57□□□□□ -1.2
PMS1P54277 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PMS1P54277 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PMS1P54277 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PMS1P54277 RNA5SP114-201ENST00000363780 113 ntBASIC7.57□□□□□ -1.2
PMS1P54277 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 AC234772.1-201ENST00000377927 937 ntBASIC7.57□□□□□ -1.2
PMS1P54277 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
PMS1P54277 LSM5-206ENST00000409987 504 ntTSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PMS1P54277 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 RPL23AP18-201ENST00000416139 468 ntBASIC7.57□□□□□ -1.2
PMS1P54277 AL158827.1-201ENST00000416300 391 ntBASIC7.57□□□□□ -1.2
PMS1P54277 AL359633.1-201ENST00000421403 310 ntBASIC7.57□□□□□ -1.2
PMS1P54277 AL645936.2-201ENST00000430565 928 ntBASIC7.57□□□□□ -1.2
PMS1P54277 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.57□□□□□ -1.2
PMS1P54277 KATNBL1P3-201ENST00000443475 909 ntBASIC7.57□□□□□ -1.2
PMS1P54277 Z73417.1-201ENST00000447373 778 ntBASIC7.57□□□□□ -1.2
PMS1P54277 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC7.57□□□□□ -1.2
PMS1P54277 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC7.57□□□□□ -1.2
PMS1P54277 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.57□□□□□ -1.2
PMS1P54277 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC7.57□□□□□ -1.2
PMS1P54277 RPS17P11-201ENST00000474297 293 ntBASIC7.57□□□□□ -1.2
PMS1P54277 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC7.57□□□□□ -1.2
PMS1P54277 SNX18P25-201ENST00000510539 758 ntBASIC7.57□□□□□ -1.2
PMS1P54277 AC011352.2-201ENST00000514574 1016 ntBASIC7.57□□□□□ -1.2
PMS1P54277 AC091163.3-201ENST00000518269 1144 ntBASIC7.57□□□□□ -1.2
PMS1P54277 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC7.57□□□□□ -1.2
PMS1P54277 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.57□□□□□ -1.2
PMS1P54277 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 EMP1-206ENST00000537612 505 ntTSL 3 BASIC7.57□□□□□ -1.2
PMS1P54277 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PMS1P54277 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC7.57□□□□□ -1.2
PMS1P54277 MTND3P13-201ENST00000574391 343 ntBASIC7.57□□□□□ -1.2
PMS1P54277 AP006587.6-201ENST00000582128 1091 ntBASIC7.57□□□□□ -1.2
PMS1P54277 RN7SL697P-201ENST00000582484 299 ntBASIC7.57□□□□□ -1.2
PMS1P54277 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.57□□□□□ -1.2
PMS1P54277 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC7.57□□□□□ -1.2
PMS1P54277 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PMS1P54277 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.57□□□□□ -1.2
PMS1P54277 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 AC021851.1-201ENST00000608537 1082 ntBASIC7.57□□□□□ -1.2
PMS1P54277 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 AL031777.2-201ENST00000611953 196 ntBASIC7.57□□□□□ -1.2
PMS1P54277 MIR6731-201ENST00000614863 72 ntBASIC7.57□□□□□ -1.2
PMS1P54277 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PMS1P54277 AC012629.3-201ENST00000623397 328 ntBASIC7.57□□□□□ -1.2
PMS1P54277 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.57□□□□□ -1.2
PMS1P54277 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 AL589993.1-201ENST00000407450 2524 ntBASIC7.57□□□□□ -1.2
PMS1P54277 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 AL512329.1-201ENST00000404600 1592 ntBASIC7.57□□□□□ -1.2
PMS1P54277 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
PMS1P54277 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
PMS1P54277 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
PMS1P54277 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
PMS1P54277 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PMS1P54277 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.57□□□□□ -1.2
PMS1P54277 AL391262.1-201ENST00000556558 1992 ntBASIC7.57□□□□□ -1.2
PMS1P54277 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
PMS1P54277 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.57□□□□□ -1.2
PMS1P54277 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.57□□□□□ -1.2
PMS1P54277 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
PMS1P54277 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.56□□□□□ -1.2
PMS1P54277 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.56□□□□□ -1.2
PMS1P54277 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PMS1P54277 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PMS1P54277 NF1-214ENST00000490416 1329 ntTSL 3 BASIC7.56□□□□□ -1.2
PMS1P54277 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PMS1P54277 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PMS1P54277 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PMS1P54277 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.56□□□□□ -1.2
PMS1P54277 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
PMS1P54277 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.56□□□□□ -1.2
PMS1P54277 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.56□□□□□ -1.2
PMS1P54277 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
PMS1P54277 RN7SKP28-201ENST00000364770 305 ntBASIC7.56□□□□□ -1.2
PMS1P54277 GAPDHP15-201ENST00000398586 975 ntBASIC7.56□□□□□ -1.2
PMS1P54277 HMGB3P19-201ENST00000403971 560 ntBASIC7.56□□□□□ -1.2
PMS1P54277 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
PMS1P54277 SNORA11D-201ENST00000408548 128 ntBASIC7.56□□□□□ -1.2
PMS1P54277 SNORA11E-201ENST00000408778 128 ntBASIC7.56□□□□□ -1.2
PMS1P54277 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.56□□□□□ -1.2
PMS1P54277 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC7.56□□□□□ -1.2
PMS1P54277 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms