Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.58□□□□□ -1.36
BRCA2P51587 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
BRCA2P51587 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
BRCA2P51587 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 MCM3AP-202ENST00000397708 6333 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
BRCA2P51587 NENFP1-201ENST00000419476 466 ntBASIC6.58□□□□□ -1.36
BRCA2P51587 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.58□□□□□ -1.36
BRCA2P51587 AC019185.1-201ENST00000442718 389 ntBASIC6.58□□□□□ -1.36
BRCA2P51587 AC007537.2-201ENST00000472093 511 ntBASIC6.58□□□□□ -1.36
BRCA2P51587 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.58□□□□□ -1.36
BRCA2P51587 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.58□□□□□ -1.36
BRCA2P51587 AL049840.6-201ENST00000604583 345 ntBASIC6.58□□□□□ -1.36
BRCA2P51587 AC183089.2-201ENST00000637931 916 ntBASIC6.58□□□□□ -1.36
BRCA2P51587 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 TIAM2-202ENST00000318981 5916 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
BRCA2P51587 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.58□□□□□ -1.36
BRCA2P51587 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
BRCA2P51587 TTL-201ENST00000233336 14269 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.58□□□□□ -1.36
BRCA2P51587 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.58□□□□□ -1.36
BRCA2P51587 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
BRCA2P51587 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.58□□□□□ -1.36
BRCA2P51587 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.58□□□□□ -1.36
BRCA2P51587 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.58□□□□□ -1.36
BRCA2P51587 AC009237.1-201ENST00000442127 744 ntBASIC6.58□□□□□ -1.36
BRCA2P51587 AP000547.1-201ENST00000454360 617 ntBASIC6.58□□□□□ -1.36
BRCA2P51587 RN7SL97P-201ENST00000486780 299 ntBASIC6.58□□□□□ -1.36
BRCA2P51587 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.58□□□□□ -1.36
BRCA2P51587 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.58□□□□□ -1.36
BRCA2P51587 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.58□□□□□ -1.36
BRCA2P51587 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 WDR36-206ENST00000612402 6592 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
BRCA2P51587 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.58□□□□□ -1.36
BRCA2P51587 AC089998.1-201ENST00000548575 3141 ntBASIC6.58□□□□□ -1.36
BRCA2P51587 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.58□□□□□ -1.36
BRCA2P51587 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
BRCA2P51587 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
BRCA2P51587 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BRCA2P51587 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
BRCA2P51587 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.57□□□□□ -1.36
BRCA2P51587 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.57□□□□□ -1.36
BRCA2P51587 AC004825.1-201ENST00000555068 586 ntBASIC6.57□□□□□ -1.36
BRCA2P51587 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BRCA2P51587 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
BRCA2P51587 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
BRCA2P51587 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC6.57□□□□□ -1.36
BRCA2P51587 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.57□□□□□ -1.36
BRCA2P51587 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BRCA2P51587 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
BRCA2P51587 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BRCA2P51587 AP004289.1-201ENST00000436307 2205 ntBASIC6.57□□□□□ -1.36
BRCA2P51587 TNPO1P2-201ENST00000426249 2665 ntBASIC6.57□□□□□ -1.36
BRCA2P51587 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC6.57□□□□□ -1.36
BRCA2P51587 GRIK3-201ENST00000373091 9101 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BRCA2P51587 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.57□□□□□ -1.36
BRCA2P51587 AC241952.1-201ENST00000612480 6897 ntBASIC6.57□□□□□ -1.36
BRCA2P51587 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BRCA2P51587 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BRCA2P51587 AC108075.1-201ENST00000424692 529 ntBASIC6.57□□□□□ -1.36
BRCA2P51587 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.57□□□□□ -1.36
BRCA2P51587 AL049745.1-201ENST00000433953 286 ntBASIC6.57□□□□□ -1.36
BRCA2P51587 RN7SL30P-201ENST00000488416 306 ntBASIC6.57□□□□□ -1.36
BRCA2P51587 AC026826.1-201ENST00000493002 361 ntBASIC6.57□□□□□ -1.36
BRCA2P51587 AC091965.3-201ENST00000506236 208 ntBASIC6.57□□□□□ -1.36
BRCA2P51587 TACC2-202ENST00000334433 9377 ntTSL 5 BASIC6.57□□□□□ -1.36
BRCA2P51587 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.57□□□□□ -1.36
BRCA2P51587 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BRCA2P51587 MAST4-201ENST00000261569 7664 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
BRCA2P51587 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
BRCA2P51587 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
BRCA2P51587 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BRCA2P51587 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BRCA2P51587 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
BRCA2P51587 AL159987.1-201ENST00000347911 293 ntBASIC6.57□□□□□ -1.36
BRCA2P51587 MIR23A-201ENST00000385245 73 ntBASIC6.57□□□□□ -1.36
BRCA2P51587 AC009804.1-201ENST00000400949 179 ntBASIC6.57□□□□□ -1.36
BRCA2P51587 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.57□□□□□ -1.36
BRCA2P51587 AC126120.1-201ENST00000431082 470 ntBASIC6.57□□□□□ -1.36
BRCA2P51587 AC245047.5-201ENST00000437312 556 ntBASIC6.57□□□□□ -1.36
BRCA2P51587 AC073594.1-201ENST00000462065 364 ntBASIC6.57□□□□□ -1.36
BRCA2P51587 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
BRCA2P51587 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
BRCA2P51587 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.57□□□□□ -1.36
BRCA2P51587 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
BRCA2P51587 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.57□□□□□ -1.36
BRCA2P51587 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC6.57□□□□□ -1.36
BRCA2P51587 AL359704.2-201ENST00000604335 521 ntBASIC6.57□□□□□ -1.36
BRCA2P51587 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
BRCA2P51587 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms