Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LINC01856-201ENST00000450840 2398 ntTSL 2 BASIC8.22□□□□□ -1.09
VARSP26640 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
VARSP26640 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
VARSP26640 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC8.22□□□□□ -1.09
VARSP26640 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC8.22□□□□□ -1.09
VARSP26640 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC8.22□□□□□ -1.09
VARSP26640 SOX9-AS1-217ENST00000623935 1563 ntTSL 5 BASIC8.22□□□□□ -1.09
VARSP26640 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC8.22□□□□□ -1.09
VARSP26640 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARSP26640 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
VARSP26640 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
VARSP26640 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC8.21□□□□□ -1.09
VARSP26640 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.21□□□□□ -1.09
VARSP26640 HCG18-244ENST00000602516 2890 ntBASIC8.21□□□□□ -1.09
VARSP26640 AC131392.2-201ENST00000505635 4332 ntBASIC8.21□□□□□ -1.09
VARSP26640 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
VARSP26640 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
VARSP26640 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
VARSP26640 AL139805.2-201ENST00000455305 2433 ntBASIC8.21□□□□□ -1.09
VARSP26640 MAPK10-329ENST00000641555 2656 ntBASIC8.21□□□□□ -1.09
VARSP26640 NACA-216ENST00000550952 2922 ntTSL 2 BASIC8.21□□□□□ -1.09
VARSP26640 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
VARSP26640 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC8.21□□□□□ -1.09
VARSP26640 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
VARSP26640 AC130464.1-201ENST00000416201 1500 ntBASIC8.21□□□□□ -1.1
VARSP26640 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
VARSP26640 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARSP26640 OR2T6-201ENST00000355728 927 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
VARSP26640 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC8.21□□□□□ -1.1
VARSP26640 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
VARSP26640 OR2T4-202ENST00000366475 1047 ntBASIC8.21□□□□□ -1.1
VARSP26640 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC8.21□□□□□ -1.1
VARSP26640 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARSP26640 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARSP26640 RNU6-332P-201ENST00000391193 108 ntBASIC8.21□□□□□ -1.1
VARSP26640 FCAR-206ENST00000391724 762 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
VARSP26640 FTH1P3-201ENST00000394290 584 ntBASIC8.21□□□□□ -1.1
VARSP26640 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARSP26640 ARF1P1-201ENST00000406466 544 ntBASIC8.21□□□□□ -1.1
VARSP26640 FTH1P26-201ENST00000406512 701 ntBASIC8.21□□□□□ -1.1
VARSP26640 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
VARSP26640 RPL21P107-201ENST00000411449 460 ntBASIC8.21□□□□□ -1.1
VARSP26640 RPL23AP39-201ENST00000415533 405 ntBASIC8.21□□□□□ -1.1
VARSP26640 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
VARSP26640 CICP10-201ENST00000439497 198 ntBASIC8.21□□□□□ -1.1
VARSP26640 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC8.21□□□□□ -1.1
VARSP26640 PCNPP2-201ENST00000441651 455 ntBASIC8.21□□□□□ -1.1
VARSP26640 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC8.21□□□□□ -1.1
VARSP26640 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC8.21□□□□□ -1.1
VARSP26640 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC8.21□□□□□ -1.1
VARSP26640 AC069213.3-201ENST00000454858 474 ntBASIC8.21□□□□□ -1.1
VARSP26640 SCDP1-201ENST00000455244 1081 ntBASIC8.21□□□□□ -1.1
VARSP26640 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC8.21□□□□□ -1.1
VARSP26640 RN7SL757P-201ENST00000466709 301 ntBASIC8.21□□□□□ -1.1
VARSP26640 RN7SL77P-201ENST00000473332 294 ntBASIC8.21□□□□□ -1.1
VARSP26640 AC105918.1-201ENST00000474399 838 ntBASIC8.21□□□□□ -1.1
VARSP26640 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC8.21□□□□□ -1.1
VARSP26640 RN7SL434P-201ENST00000495872 271 ntBASIC8.21□□□□□ -1.1
VARSP26640 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
VARSP26640 AC021678.1-201ENST00000505195 936 ntBASIC8.21□□□□□ -1.1
VARSP26640 SNCA-211ENST00000508895 905 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
VARSP26640 AC015909.1-201ENST00000509943 839 ntTSL 3 BASIC8.21□□□□□ -1.1
VARSP26640 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC8.21□□□□□ -1.1
VARSP26640 PTGES3P3-201ENST00000511479 482 ntBASIC8.21□□□□□ -1.1
VARSP26640 LINC00499-204ENST00000515282 579 ntTSL 5 BASIC8.21□□□□□ -1.1
VARSP26640 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC8.21□□□□□ -1.1
VARSP26640 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC8.21□□□□□ -1.1
VARSP26640 OR5AQ1P-201ENST00000527596 927 ntBASIC8.21□□□□□ -1.1
VARSP26640 AP000873.3-201ENST00000531869 766 ntTSL 5 BASIC8.21□□□□□ -1.1
VARSP26640 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC8.21□□□□□ -1.1
VARSP26640 AC079031.2-201ENST00000537742 615 ntBASIC8.21□□□□□ -1.1
VARSP26640 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC8.21□□□□□ -1.1
VARSP26640 GTF2IP22-201ENST00000554443 182 ntBASIC8.21□□□□□ -1.1
VARSP26640 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
VARSP26640 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC8.21□□□□□ -1.1
VARSP26640 EIF4A1P9-201ENST00000576035 1207 ntBASIC8.21□□□□□ -1.1
VARSP26640 AC005552.1-201ENST00000577556 662 ntBASIC8.21□□□□□ -1.1
VARSP26640 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC8.21□□□□□ -1.1
VARSP26640 MIR4795-201ENST00000584182 89 ntBASIC8.21□□□□□ -1.1
VARSP26640 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC8.21□□□□□ -1.1
VARSP26640 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC8.21□□□□□ -1.1
VARSP26640 AL078623.1-201ENST00000602702 907 ntBASIC8.21□□□□□ -1.1
VARSP26640 CARSP1-201ENST00000603171 889 ntBASIC8.21□□□□□ -1.1
VARSP26640 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC8.21□□□□□ -1.1
VARSP26640 SNCA-212ENST00000611107 297 ntTSL 5 BASIC8.21□□□□□ -1.1
VARSP26640 AC009233.1-201ENST00000616477 371 ntBASIC8.21□□□□□ -1.1
VARSP26640 MIR6807-201ENST00000621968 92 ntBASIC8.21□□□□□ -1.1
VARSP26640 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC8.21□□□□□ -1.1
VARSP26640 AL355480.4-201ENST00000626823 69 ntBASIC8.21□□□□□ -1.1
VARSP26640 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC8.21□□□□□ -1.1
VARSP26640 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
VARSP26640 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
VARSP26640 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC8.21□□□□□ -1.1
VARSP26640 ARHGAP42P5-201ENST00000548856 2936 ntBASIC8.21□□□□□ -1.1
VARSP26640 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC8.21□□□□□ -1.1
VARSP26640 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms