Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 AP002004.1-206ENST00000532441 876 ntBASIC6.42□□□□□ -1.38
VMP1Q96GC9 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 AP005901.4-201ENST00000577336 569 ntBASIC6.42□□□□□ -1.38
VMP1Q96GC9 RN7SL32P-201ENST00000580514 281 ntBASIC6.42□□□□□ -1.38
VMP1Q96GC9 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 AC026951.2-201ENST00000613847 241 ntBASIC6.42□□□□□ -1.38
VMP1Q96GC9 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.42□□□□□ -1.38
VMP1Q96GC9 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 DLEU2L-201ENST00000371086 3555 ntBASIC6.42□□□□□ -1.38
VMP1Q96GC9 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VMP1Q96GC9 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VMP1Q96GC9 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VMP1Q96GC9 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
VMP1Q96GC9 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
VMP1Q96GC9 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 RNA5SP251-201ENST00000410614 137 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 RN7SKP91-201ENST00000410852 288 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 RPL18AP14-201ENST00000417685 526 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 UBE2V2P1-201ENST00000434717 398 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 AL451136.1-201ENST00000435399 325 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 RAB9AP5-201ENST00000437794 597 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 RAB9AP2-201ENST00000443911 597 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 AC236972.4-201ENST00000458091 963 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 RN7SL372P-201ENST00000461982 298 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 RN7SL259P-201ENST00000478499 253 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 AC084337.1-201ENST00000524809 686 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 OR4A21P-201ENST00000532759 944 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 AC016144.1-201ENST00000548175 1087 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 PPIAP6-201ENST00000557078 499 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VMP1Q96GC9 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 SNORA70D-201ENST00000578836 135 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 U91328.4-201ENST00000608919 517 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 AL445647.2-201ENST00000615170 130 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 AC131009.3-201ENST00000621809 287 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VMP1Q96GC9 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
VMP1Q96GC9 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 AC005225.5-201ENST00000623547 2225 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 AC067942.1-201ENST00000488045 1493 ntBASIC6.41□□□□□ -1.38
VMP1Q96GC9 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.41□□□□□ -1.38
VMP1Q96GC9 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VMP1Q96GC9 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VMP1Q96GC9 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VMP1Q96GC9 AC068769.1-201ENST00000474767 2426 ntBASIC6.4□□□□□ -1.38
VMP1Q96GC9 AL512329.1-201ENST00000404600 1592 ntBASIC6.4□□□□□ -1.38
VMP1Q96GC9 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VMP1Q96GC9 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.4□□□□□ -1.38
VMP1Q96GC9 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VMP1Q96GC9 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VMP1Q96GC9 DDX43P1-201ENST00000510713 1763 ntBASIC6.4□□□□□ -1.38
VMP1Q96GC9 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms